Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.54□□□□□ -0.24
CASP6P55212 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CASP6P55212 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CASP6P55212 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.54□□□□□ -0.24
CASP6P55212 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.54□□□□□ -0.24
CASP6P55212 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
CASP6P55212 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CASP6P55212 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CASP6P55212 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.54□□□□□ -0.24
CASP6P55212 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CASP6P55212 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CASP6P55212 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
CASP6P55212 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.54□□□□□ -0.24
CASP6P55212 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.54□□□□□ -0.24
CASP6P55212 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
CASP6P55212 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CASP6P55212 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CASP6P55212 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CASP6P55212 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.54□□□□□ -0.24
CASP6P55212 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CASP6P55212 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CASP6P55212 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CASP6P55212 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.54□□□□□ -0.24
CASP6P55212 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CASP6P55212 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CASP6P55212 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CASP6P55212 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CASP6P55212 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CASP6P55212 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.53□□□□□ -0.24
CASP6P55212 AC055811.4-201ENST00000624039 1754 ntBASIC13.53□□□□□ -0.24
CASP6P55212 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.53□□□□□ -0.24
CASP6P55212 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CASP6P55212 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.53□□□□□ -0.24
CASP6P55212 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.53□□□□□ -0.24
CASP6P55212 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CASP6P55212 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CASP6P55212 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CASP6P55212 POM121L8P-201ENST00000417732 1281 ntBASIC13.53□□□□□ -0.24
CASP6P55212 AC016700.1-201ENST00000429424 312 ntBASIC13.53□□□□□ -0.24
CASP6P55212 NKAIN1P1-201ENST00000435754 582 ntBASIC13.53□□□□□ -0.24
CASP6P55212 POM121L9P-203ENST00000441984 1285 ntBASIC13.53□□□□□ -0.24
CASP6P55212 HIST2H2BB-201ENST00000449108 381 ntBASIC13.53□□□□□ -0.24
CASP6P55212 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.53□□□□□ -0.24
CASP6P55212 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
CASP6P55212 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.53□□□□□ -0.24
CASP6P55212 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 AC105129.2-201ENST00000559536 390 ntBASIC13.53□□□□□ -0.24
CASP6P55212 RN7SL163P-201ENST00000583100 276 ntBASIC13.53□□□□□ -0.24
CASP6P55212 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.53□□□□□ -0.24
CASP6P55212 AC073413.1-201ENST00000603927 732 ntBASIC13.53□□□□□ -0.24
CASP6P55212 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 PCDHA14-201ENST00000506751 2298 ntBASIC13.53□□□□□ -0.24
CASP6P55212 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.53□□□□□ -0.24
CASP6P55212 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.53□□□□□ -0.24
CASP6P55212 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.53□□□□□ -0.24
CASP6P55212 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.53□□□□□ -0.24
CASP6P55212 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CASP6P55212 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CASP6P55212 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CASP6P55212 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.53□□□□□ -0.24
CASP6P55212 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CASP6P55212 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CASP6P55212 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CASP6P55212 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CASP6P55212 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.52□□□□□ -0.24
CASP6P55212 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CASP6P55212 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CASP6P55212 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CASP6P55212 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.52□□□□□ -0.24
CASP6P55212 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.52□□□□□ -0.24
CASP6P55212 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CASP6P55212 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CASP6P55212 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms