Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC004945.1-201ENST00000416738 983 ntBASIC10.98□□□□□ -0.65
APOC4P55056 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC10.98□□□□□ -0.65
APOC4P55056 RGS5-214ENST00000429865 754 ntTSL 3 BASIC10.98□□□□□ -0.65
APOC4P55056 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
APOC4P55056 POM121L10P-201ENST00000436994 1285 ntBASIC10.98□□□□□ -0.65
APOC4P55056 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
APOC4P55056 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC10.98□□□□□ -0.65
APOC4P55056 AC104306.2-201ENST00000451877 341 ntBASIC10.98□□□□□ -0.65
APOC4P55056 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC10.98□□□□□ -0.65
APOC4P55056 ARTN-209ENST00000479128 471 ntTSL 3 BASIC10.98□□□□□ -0.65
APOC4P55056 AC108725.1-201ENST00000495472 409 ntBASIC10.98□□□□□ -0.65
APOC4P55056 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
APOC4P55056 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC10.98□□□□□ -0.65
APOC4P55056 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC10.98□□□□□ -0.65
APOC4P55056 KLK3-211ENST00000597483 810 ntTSL 2 BASIC10.98□□□□□ -0.65
APOC4P55056 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
APOC4P55056 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
APOC4P55056 PRKN-211ENST00000615065 261 ntTSL 5 BASIC10.98□□□□□ -0.65
APOC4P55056 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
APOC4P55056 ABBA01031663.1-201ENST00000635630 790 ntBASIC10.98□□□□□ -0.65
APOC4P55056 AC002472.3-201ENST00000640124 621 ntBASIC10.98□□□□□ -0.65
APOC4P55056 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
APOC4P55056 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
APOC4P55056 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
APOC4P55056 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
APOC4P55056 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
APOC4P55056 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
APOC4P55056 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC10.98□□□□□ -0.65
APOC4P55056 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC10.98□□□□□ -0.65
APOC4P55056 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
APOC4P55056 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
APOC4P55056 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
APOC4P55056 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
APOC4P55056 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC10.98□□□□□ -0.65
APOC4P55056 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
APOC4P55056 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
APOC4P55056 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
APOC4P55056 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
APOC4P55056 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC10.97□□□□□ -0.65
APOC4P55056 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC10.97□□□□□ -0.65
APOC4P55056 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC10.97□□□□□ -0.65
APOC4P55056 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC10.97□□□□□ -0.65
APOC4P55056 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC10.97□□□□□ -0.65
APOC4P55056 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
APOC4P55056 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
APOC4P55056 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 TISP43-201ENST00000409793 538 ntTSL 4 BASIC10.97□□□□□ -0.65
APOC4P55056 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC10.97□□□□□ -0.65
APOC4P55056 AC006033.1-201ENST00000440505 426 ntBASIC10.97□□□□□ -0.65
APOC4P55056 AC021723.1-201ENST00000486306 515 ntBASIC10.97□□□□□ -0.65
APOC4P55056 RPSAP36-202ENST00000494591 1261 ntBASIC10.97□□□□□ -0.65
APOC4P55056 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC10.97□□□□□ -0.65
APOC4P55056 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC10.97□□□□□ -0.65
APOC4P55056 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC10.97□□□□□ -0.65
APOC4P55056 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC10.97□□□□□ -0.65
APOC4P55056 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC10.97□□□□□ -0.65
APOC4P55056 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
APOC4P55056 AC103810.3-201ENST00000583567 96 ntBASIC10.97□□□□□ -0.65
APOC4P55056 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
APOC4P55056 AC138696.2-201ENST00000607376 223 ntBASIC10.97□□□□□ -0.65
APOC4P55056 AL118558.3-201ENST00000607414 1079 ntBASIC10.97□□□□□ -0.65
APOC4P55056 AL136301.1-201ENST00000615830 422 ntBASIC10.97□□□□□ -0.65
APOC4P55056 AC244452.3-201ENST00000636814 210 ntBASIC10.97□□□□□ -0.65
APOC4P55056 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC10.97□□□□□ -0.65
APOC4P55056 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC10.97□□□□□ -0.65
APOC4P55056 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC10.97□□□□□ -0.65
APOC4P55056 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC10.97□□□□□ -0.65
APOC4P55056 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC10.97□□□□□ -0.65
APOC4P55056 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC10.97□□□□□ -0.65
APOC4P55056 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 AP000845.1-201ENST00000581677 2131 ntBASIC10.97□□□□□ -0.65
APOC4P55056 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC10.97□□□□□ -0.65
APOC4P55056 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC10.97□□□□□ -0.65
APOC4P55056 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 AL162727.3-201ENST00000635661 2787 ntBASIC10.97□□□□□ -0.65
APOC4P55056 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
APOC4P55056 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
APOC4P55056 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
APOC4P55056 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
APOC4P55056 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC10.97□□□□□ -0.65
APOC4P55056 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
APOC4P55056 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
APOC4P55056 PAUPAR-201ENST00000630360 2965 ntBASIC10.96□□□□□ -0.65
APOC4P55056 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms