Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 ECM1P1-201ENST00000604092 1279 ntBASIC15.12■□□□□ 0.01
CHRNA4P43681 AC012645.4-201ENST00000610691 1061 ntBASIC15.12■□□□□ 0.01
CHRNA4P43681 AC244669.2-201ENST00000612320 853 ntBASIC15.12■□□□□ 0.01
CHRNA4P43681 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.12■□□□□ 0.01
CHRNA4P43681 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.12■□□□□ 0.01
CHRNA4P43681 ENPP7P14-201ENST00000621765 1040 ntBASIC15.12■□□□□ 0.01
CHRNA4P43681 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CHRNA4P43681 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CHRNA4P43681 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.12■□□□□ 0.01
CHRNA4P43681 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.12■□□□□ 0.01
CHRNA4P43681 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA4P43681 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA4P43681 AC126755.1-201ENST00000525846 6405 ntBASIC15.12■□□□□ 0.01
CHRNA4P43681 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CHRNA4P43681 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA4P43681 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CHRNA4P43681 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
CHRNA4P43681 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA4P43681 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA4P43681 AC020910.5-201ENST00000623668 1865 ntBASIC15.12■□□□□ 0.01
CHRNA4P43681 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA4P43681 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.12■□□□□ 0.01
CHRNA4P43681 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA4P43681 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.12■□□□□ 0.01
CHRNA4P43681 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRNA4P43681 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.11■□□□□ 0.01
CHRNA4P43681 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CHRNA4P43681 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CHRNA4P43681 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRNA4P43681 AL354702.1-201ENST00000442006 1960 ntBASIC15.11■□□□□ 0.01
CHRNA4P43681 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHRNA4P43681 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CHRNA4P43681 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRNA4P43681 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.11■□□□□ 0.01
CHRNA4P43681 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 RN7SKP230-201ENST00000365642 335 ntBASIC15.11■□□□□ 0.01
CHRNA4P43681 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CHRNA4P43681 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.11■□□□□ 0.01
CHRNA4P43681 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 AC007969.1-201ENST00000433675 447 ntBASIC15.11■□□□□ 0.01
CHRNA4P43681 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.11■□□□□ 0.01
CHRNA4P43681 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 FTH1P14-201ENST00000482930 551 ntBASIC15.11■□□□□ 0.01
CHRNA4P43681 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.11■□□□□ 0.01
CHRNA4P43681 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CHRNA4P43681 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CHRNA4P43681 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CHRNA4P43681 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.11■□□□□ 0.01
CHRNA4P43681 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CHRNA4P43681 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CHRNA4P43681 BTNL10-201ENST00000595971 695 ntBASIC15.11■□□□□ 0.01
CHRNA4P43681 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.11■□□□□ 0.01
CHRNA4P43681 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CHRNA4P43681 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.11■□□□□ 0.01
CHRNA4P43681 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.11■□□□□ 0.01
CHRNA4P43681 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.11■□□□□ 0.01
CHRNA4P43681 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRNA4P43681 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRNA4P43681 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
CHRNA4P43681 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.11■□□□□ 0.01
CHRNA4P43681 AC011840.2-201ENST00000563063 1520 ntBASIC15.11■□□□□ 0.01
CHRNA4P43681 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CHRNA4P43681 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRNA4P43681 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHRNA4P43681 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA4P43681 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.1■□□□□ 0.01
CHRNA4P43681 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA4P43681 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA4P43681 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA4P43681 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA4P43681 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA4P43681 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA4P43681 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA4P43681 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRNA4P43681 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms