Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.71□□□□□ -0.05
TRIM23P36406 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.71□□□□□ -0.05
TRIM23P36406 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.71□□□□□ -0.05
TRIM23P36406 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.71□□□□□ -0.05
TRIM23P36406 AC022748.3-201ENST00000621828 275 ntBASIC14.71□□□□□ -0.05
TRIM23P36406 AL162426.1-201ENST00000624141 743 ntBASIC14.71□□□□□ -0.05
TRIM23P36406 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.71□□□□□ -0.05
TRIM23P36406 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRIM23P36406 KRT8P29-201ENST00000420409 1371 ntBASIC14.71□□□□□ -0.06
TRIM23P36406 TNRC18P2-201ENST00000417666 2714 ntBASIC14.71□□□□□ -0.06
TRIM23P36406 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRIM23P36406 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRIM23P36406 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM23P36406 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM23P36406 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TRIM23P36406 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM23P36406 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM23P36406 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRIM23P36406 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM23P36406 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.7□□□□□ -0.06
TRIM23P36406 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRIM23P36406 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.7□□□□□ -0.06
TRIM23P36406 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRIM23P36406 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM23P36406 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM23P36406 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM23P36406 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM23P36406 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM23P36406 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM23P36406 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM23P36406 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM23P36406 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM23P36406 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM23P36406 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM23P36406 FAM58BP-201ENST00000439056 645 ntBASIC14.7□□□□□ -0.06
TRIM23P36406 TUBB8P8-201ENST00000458717 1058 ntBASIC14.7□□□□□ -0.06
TRIM23P36406 SERPINA13P-202ENST00000478994 924 ntBASIC14.7□□□□□ -0.06
TRIM23P36406 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM23P36406 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.7□□□□□ -0.06
TRIM23P36406 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
TRIM23P36406 AC005324.6-201ENST00000587972 613 ntBASIC14.7□□□□□ -0.06
TRIM23P36406 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM23P36406 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
TRIM23P36406 AC244452.3-201ENST00000636814 210 ntBASIC14.7□□□□□ -0.06
TRIM23P36406 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.7□□□□□ -0.06
TRIM23P36406 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRIM23P36406 AC007292.2-201ENST00000593524 1812 ntBASIC14.7□□□□□ -0.06
TRIM23P36406 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TRIM23P36406 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM23P36406 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.7□□□□□ -0.06
TRIM23P36406 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRIM23P36406 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM23P36406 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM23P36406 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.7□□□□□ -0.06
TRIM23P36406 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM23P36406 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRIM23P36406 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRIM23P36406 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.69□□□□□ -0.06
TRIM23P36406 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.69□□□□□ -0.06
TRIM23P36406 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
TRIM23P36406 NORAD-201ENST00000565493 5339 ntBASIC14.69□□□□□ -0.06
TRIM23P36406 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
TRIM23P36406 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
TRIM23P36406 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.69□□□□□ -0.06
TRIM23P36406 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.69□□□□□ -0.06
TRIM23P36406 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
TRIM23P36406 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.69□□□□□ -0.06
TRIM23P36406 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
TRIM23P36406 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.69□□□□□ -0.06
TRIM23P36406 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.69□□□□□ -0.06
TRIM23P36406 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.69□□□□□ -0.06
TRIM23P36406 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.69□□□□□ -0.06
TRIM23P36406 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.69□□□□□ -0.06
TRIM23P36406 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.69□□□□□ -0.06
TRIM23P36406 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.69□□□□□ -0.06
TRIM23P36406 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.69□□□□□ -0.06
TRIM23P36406 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.69□□□□□ -0.06
TRIM23P36406 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TRIM23P36406 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 BNIP3P13-201ENST00000599968 566 ntBASIC14.69□□□□□ -0.06
TRIM23P36406 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.69□□□□□ -0.06
TRIM23P36406 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.69□□□□□ -0.06
TRIM23P36406 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM23P36406 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms