Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.83■□□□□ 0.13
RFC1P35251 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RFC1P35251 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RFC1P35251 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.83■□□□□ 0.13
RFC1P35251 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.83■□□□□ 0.13
RFC1P35251 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RFC1P35251 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
RFC1P35251 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RFC1P35251 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.83■□□□□ 0.13
RFC1P35251 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.83■□□□□ 0.12
RFC1P35251 ST20-AS1-201ENST00000560255 4223 ntBASIC15.83■□□□□ 0.12
RFC1P35251 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RFC1P35251 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFC1P35251 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFC1P35251 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RFC1P35251 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.83■□□□□ 0.12
RFC1P35251 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.83■□□□□ 0.12
RFC1P35251 KRT18P25-201ENST00000508931 1278 ntBASIC15.83■□□□□ 0.12
RFC1P35251 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.83■□□□□ 0.12
RFC1P35251 MIR3197-201ENST00000582241 73 ntBASIC15.83■□□□□ 0.12
RFC1P35251 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFC1P35251 AC010319.3-201ENST00000597028 470 ntBASIC15.83■□□□□ 0.12
RFC1P35251 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFC1P35251 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RFC1P35251 KRT8P35-201ENST00000483942 1338 ntBASIC15.83■□□□□ 0.12
RFC1P35251 AL009178.2-201ENST00000597278 2719 ntBASIC15.83■□□□□ 0.12
RFC1P35251 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFC1P35251 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFC1P35251 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RFC1P35251 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RFC1P35251 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.83■□□□□ 0.12
RFC1P35251 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
RFC1P35251 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.83■□□□□ 0.12
RFC1P35251 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFC1P35251 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFC1P35251 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.82■□□□□ 0.12
RFC1P35251 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFC1P35251 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFC1P35251 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFC1P35251 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFC1P35251 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.82■□□□□ 0.12
RFC1P35251 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.82■□□□□ 0.12
RFC1P35251 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.82■□□□□ 0.12
RFC1P35251 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RFC1P35251 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFC1P35251 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.82■□□□□ 0.12
RFC1P35251 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.82■□□□□ 0.12
RFC1P35251 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.82■□□□□ 0.12
RFC1P35251 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.82■□□□□ 0.12
RFC1P35251 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.82■□□□□ 0.12
RFC1P35251 AC004466.1-201ENST00000599515 1080 ntBASIC15.82■□□□□ 0.12
RFC1P35251 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFC1P35251 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RFC1P35251 AL603764.1-201ENST00000636452 321 ntBASIC15.82■□□□□ 0.12
RFC1P35251 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
RFC1P35251 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.82■□□□□ 0.12
RFC1P35251 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.82■□□□□ 0.12
RFC1P35251 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFC1P35251 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
RFC1P35251 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFC1P35251 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFC1P35251 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
RFC1P35251 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFC1P35251 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFC1P35251 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.82■□□□□ 0.12
RFC1P35251 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFC1P35251 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RFC1P35251 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.82■□□□□ 0.12
RFC1P35251 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RFC1P35251 AC113367.3-201ENST00000508316 1912 ntBASIC15.82■□□□□ 0.12
RFC1P35251 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFC1P35251 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.82■□□□□ 0.12
RFC1P35251 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.82■□□□□ 0.12
RFC1P35251 AC097359.2-201ENST00000604992 2389 ntBASIC15.82■□□□□ 0.12
RFC1P35251 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.82■□□□□ 0.12
RFC1P35251 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.81■□□□□ 0.12
RFC1P35251 AC007191.1-201ENST00000623179 2995 ntBASIC15.81■□□□□ 0.12
RFC1P35251 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFC1P35251 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.81■□□□□ 0.12
RFC1P35251 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFC1P35251 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFC1P35251 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFC1P35251 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFC1P35251 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RFC1P35251 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RFC1P35251 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RFC1P35251 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFC1P35251 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFC1P35251 AC098614.1-201ENST00000368528 745 ntBASIC15.81■□□□□ 0.12
RFC1P35251 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RFC1P35251 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RFC1P35251 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFC1P35251 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RFC1P35251 BAATP1-201ENST00000412284 1225 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms