Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 REXO1L2P-201ENST00000425429 2069 ntBASIC12.68□□□□□ -0.38
COL8A2P25067 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
COL8A2P25067 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COL8A2P25067 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.68□□□□□ -0.38
COL8A2P25067 INE2-201ENST00000630399 1874 ntBASIC12.68□□□□□ -0.38
COL8A2P25067 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
COL8A2P25067 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.67□□□□□ -0.38
COL8A2P25067 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
COL8A2P25067 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.67□□□□□ -0.38
COL8A2P25067 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.67□□□□□ -0.38
COL8A2P25067 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.67□□□□□ -0.38
COL8A2P25067 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.67□□□□□ -0.38
COL8A2P25067 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.67□□□□□ -0.38
COL8A2P25067 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.67□□□□□ -0.38
COL8A2P25067 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.67□□□□□ -0.38
COL8A2P25067 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.67□□□□□ -0.38
COL8A2P25067 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
COL8A2P25067 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.67□□□□□ -0.38
COL8A2P25067 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.67□□□□□ -0.38
COL8A2P25067 AL022328.3-201ENST00000607943 679 ntBASIC12.67□□□□□ -0.38
COL8A2P25067 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.67□□□□□ -0.38
COL8A2P25067 AC244093.1-201ENST00000610837 814 ntBASIC12.67□□□□□ -0.38
COL8A2P25067 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.67□□□□□ -0.38
COL8A2P25067 AL096828.3-201ENST00000615354 462 ntBASIC12.67□□□□□ -0.38
COL8A2P25067 AC244157.2-201ENST00000616239 1006 ntBASIC12.67□□□□□ -0.38
COL8A2P25067 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
COL8A2P25067 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.67□□□□□ -0.38
COL8A2P25067 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
COL8A2P25067 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.67□□□□□ -0.38
COL8A2P25067 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.67□□□□□ -0.38
COL8A2P25067 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC12.67□□□□□ -0.38
COL8A2P25067 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.67□□□□□ -0.38
COL8A2P25067 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.67□□□□□ -0.38
COL8A2P25067 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
COL8A2P25067 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
COL8A2P25067 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COL8A2P25067 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.66□□□□□ -0.38
COL8A2P25067 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.66□□□□□ -0.38
COL8A2P25067 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.66□□□□□ -0.38
COL8A2P25067 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
COL8A2P25067 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.66□□□□□ -0.38
COL8A2P25067 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 MROH4P-201ENST00000431302 1578 ntBASIC12.66□□□□□ -0.38
COL8A2P25067 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.66□□□□□ -0.38
COL8A2P25067 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.66□□□□□ -0.38
COL8A2P25067 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.66□□□□□ -0.38
COL8A2P25067 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.66□□□□□ -0.38
COL8A2P25067 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 AC099548.2-209ENST00000480264 625 ntBASIC12.66□□□□□ -0.38
COL8A2P25067 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.66□□□□□ -0.38
COL8A2P25067 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.66□□□□□ -0.38
COL8A2P25067 ZNF767P-206ENST00000513792 565 ntBASIC12.66□□□□□ -0.38
COL8A2P25067 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.66□□□□□ -0.38
COL8A2P25067 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
COL8A2P25067 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.66□□□□□ -0.38
COL8A2P25067 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.66□□□□□ -0.38
COL8A2P25067 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COL8A2P25067 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms