Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 CRB3P1-201ENST00000449338 276 ntBASIC13.29□□□□□ -0.28
MSR1P21757 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.29□□□□□ -0.28
MSR1P21757 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MSR1P21757 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.29□□□□□ -0.28
MSR1P21757 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.29□□□□□ -0.28
MSR1P21757 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.29□□□□□ -0.28
MSR1P21757 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.29□□□□□ -0.28
MSR1P21757 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.29□□□□□ -0.28
MSR1P21757 AC092364.2-202ENST00000597012 1073 ntBASIC13.29□□□□□ -0.28
MSR1P21757 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.29□□□□□ -0.28
MSR1P21757 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MSR1P21757 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MSR1P21757 KRT8P35-201ENST00000483942 1338 ntBASIC13.29□□□□□ -0.28
MSR1P21757 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MSR1P21757 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MSR1P21757 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MSR1P21757 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MSR1P21757 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.29□□□□□ -0.28
MSR1P21757 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
MSR1P21757 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MSR1P21757 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MSR1P21757 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
MSR1P21757 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
MSR1P21757 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MSR1P21757 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
MSR1P21757 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
MSR1P21757 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.29□□□□□ -0.28
MSR1P21757 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.29□□□□□ -0.28
MSR1P21757 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.29□□□□□ -0.28
MSR1P21757 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MSR1P21757 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.29□□□□□ -0.28
MSR1P21757 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
MSR1P21757 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MSR1P21757 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.29□□□□□ -0.28
MSR1P21757 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
MSR1P21757 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.28□□□□□ -0.28
MSR1P21757 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.28□□□□□ -0.28
MSR1P21757 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.28□□□□□ -0.28
MSR1P21757 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.28□□□□□ -0.28
MSR1P21757 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 AC140479.7-201ENST00000636301 2332 ntBASIC13.28□□□□□ -0.28
MSR1P21757 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.28□□□□□ -0.28
MSR1P21757 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.28□□□□□ -0.28
MSR1P21757 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
MSR1P21757 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
MSR1P21757 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
MSR1P21757 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.28□□□□□ -0.28
MSR1P21757 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.28□□□□□ -0.28
MSR1P21757 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.28□□□□□ -0.28
MSR1P21757 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.28□□□□□ -0.28
MSR1P21757 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
MSR1P21757 AC022137.2-201ENST00000503482 481 ntBASIC13.28□□□□□ -0.28
MSR1P21757 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.28□□□□□ -0.28
MSR1P21757 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.28□□□□□ -0.28
MSR1P21757 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.28□□□□□ -0.28
MSR1P21757 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
MSR1P21757 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.28□□□□□ -0.28
MSR1P21757 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.28□□□□□ -0.28
MSR1P21757 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
MSR1P21757 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.28□□□□□ -0.28
MSR1P21757 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.28□□□□□ -0.28
MSR1P21757 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.28□□□□□ -0.28
MSR1P21757 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.28□□□□□ -0.28
MSR1P21757 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.28□□□□□ -0.28
MSR1P21757 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.28□□□□□ -0.28
MSR1P21757 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.28□□□□□ -0.28
MSR1P21757 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
MSR1P21757 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
MSR1P21757 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
MSR1P21757 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
MSR1P21757 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.27□□□□□ -0.28
MSR1P21757 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
MSR1P21757 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
MSR1P21757 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
MSR1P21757 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.27□□□□□ -0.28
MSR1P21757 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
MSR1P21757 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.27□□□□□ -0.28
MSR1P21757 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.27□□□□□ -0.28
MSR1P21757 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
MSR1P21757 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms