Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.42■□□□□ 0.06
ERCC2P18074 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.42■□□□□ 0.06
ERCC2P18074 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.42■□□□□ 0.06
ERCC2P18074 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.42■□□□□ 0.06
ERCC2P18074 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.42■□□□□ 0.06
ERCC2P18074 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ERCC2P18074 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.42■□□□□ 0.06
ERCC2P18074 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.42■□□□□ 0.06
ERCC2P18074 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERCC2P18074 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERCC2P18074 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.42■□□□□ 0.06
ERCC2P18074 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.42■□□□□ 0.06
ERCC2P18074 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
ERCC2P18074 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
ERCC2P18074 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
ERCC2P18074 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
ERCC2P18074 FAM45BP-202ENST00000592932 1624 ntBASIC15.42■□□□□ 0.06
ERCC2P18074 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERCC2P18074 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERCC2P18074 AC011840.2-201ENST00000563063 1520 ntBASIC15.42■□□□□ 0.06
ERCC2P18074 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERCC2P18074 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
ERCC2P18074 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
ERCC2P18074 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERCC2P18074 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.42■□□□□ 0.06
ERCC2P18074 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERCC2P18074 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
ERCC2P18074 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ERCC2P18074 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.41■□□□□ 0.06
ERCC2P18074 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC2P18074 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.41■□□□□ 0.06
ERCC2P18074 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
ERCC2P18074 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC2P18074 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC2P18074 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC2P18074 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC2P18074 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC2P18074 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC2P18074 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC2P18074 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC2P18074 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
ERCC2P18074 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ERCC2P18074 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC2P18074 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC2P18074 AC005034.1-201ENST00000426657 489 ntBASIC15.41■□□□□ 0.06
ERCC2P18074 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.41■□□□□ 0.06
ERCC2P18074 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
ERCC2P18074 CROCCP4-201ENST00000457096 498 ntBASIC15.41■□□□□ 0.06
ERCC2P18074 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
ERCC2P18074 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.41■□□□□ 0.06
ERCC2P18074 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.41■□□□□ 0.06
ERCC2P18074 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.41■□□□□ 0.06
ERCC2P18074 AC138696.2-201ENST00000607376 223 ntBASIC15.41■□□□□ 0.06
ERCC2P18074 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC2P18074 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.41■□□□□ 0.06
ERCC2P18074 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ERCC2P18074 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC2P18074 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC2P18074 AC020910.5-201ENST00000623668 1865 ntBASIC15.41■□□□□ 0.06
ERCC2P18074 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
ERCC2P18074 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ERCC2P18074 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC2P18074 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.41■□□□□ 0.06
ERCC2P18074 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ERCC2P18074 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC2P18074 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
ERCC2P18074 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.41■□□□□ 0.06
ERCC2P18074 AC015656.1-201ENST00000624209 3578 ntBASIC15.41■□□□□ 0.06
ERCC2P18074 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
ERCC2P18074 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ERCC2P18074 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.41■□□□□ 0.06
ERCC2P18074 FKBP4P6-201ENST00000457486 1332 ntBASIC15.41■□□□□ 0.06
ERCC2P18074 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC2P18074 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ERCC2P18074 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.4■□□□□ 0.06
ERCC2P18074 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC2P18074 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC2P18074 AL354702.1-201ENST00000442006 1960 ntBASIC15.4■□□□□ 0.06
ERCC2P18074 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.4■□□□□ 0.06
ERCC2P18074 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC2P18074 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC2P18074 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.4■□□□□ 0.06
ERCC2P18074 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ERCC2P18074 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC2P18074 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC2P18074 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ERCC2P18074 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC2P18074 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC2P18074 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.4■□□□□ 0.06
ERCC2P18074 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC2P18074 CNN2P8-201ENST00000421872 913 ntBASIC15.4■□□□□ 0.06
ERCC2P18074 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
ERCC2P18074 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.4■□□□□ 0.06
ERCC2P18074 AL391280.1-201ENST00000506969 1062 ntBASIC15.4■□□□□ 0.06
ERCC2P18074 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.4■□□□□ 0.06
ERCC2P18074 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ERCC2P18074 AC078819.1-201ENST00000547454 765 ntBASIC15.4■□□□□ 0.06
ERCC2P18074 AC012085.1-201ENST00000548270 765 ntBASIC15.4■□□□□ 0.06
ERCC2P18074 KRT90P-201ENST00000549264 1064 ntBASIC15.4■□□□□ 0.06
ERCC2P18074 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms