Protein–RNA interactions for Protein: P11171

EPB41, Protein 4.1, humanhuman

Known RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41P11171 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
EPB41P11171 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
EPB41P11171 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
EPB41P11171 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 KRT8P35-201ENST00000483942 1338 ntBASIC16.48■□□□□ 0.23
EPB41P11171 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.48■□□□□ 0.23
EPB41P11171 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.48■□□□□ 0.23
EPB41P11171 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.48■□□□□ 0.23
EPB41P11171 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
EPB41P11171 EIF3FP3-201ENST00000434851 1086 ntBASIC16.48■□□□□ 0.23
EPB41P11171 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.48■□□□□ 0.23
EPB41P11171 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.48■□□□□ 0.23
EPB41P11171 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.48■□□□□ 0.23
EPB41P11171 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 AC026434.2-201ENST00000506094 1078 ntBASIC16.48■□□□□ 0.23
EPB41P11171 AC009486.1-201ENST00000569860 813 ntBASIC16.48■□□□□ 0.23
EPB41P11171 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.48■□□□□ 0.23
EPB41P11171 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
EPB41P11171 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
EPB41P11171 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.48■□□□□ 0.23
EPB41P11171 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.48■□□□□ 0.23
EPB41P11171 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
EPB41P11171 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.48■□□□□ 0.23
EPB41P11171 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPB41P11171 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPB41P11171 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPB41P11171 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPB41P11171 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EPB41P11171 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.47■□□□□ 0.23
EPB41P11171 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPB41P11171 AC113367.3-201ENST00000508316 1912 ntBASIC16.47■□□□□ 0.23
EPB41P11171 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPB41P11171 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.47■□□□□ 0.23
EPB41P11171 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPB41P11171 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
EPB41P11171 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.47■□□□□ 0.23
EPB41P11171 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.47■□□□□ 0.23
EPB41P11171 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.47■□□□□ 0.23
EPB41P11171 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.47■□□□□ 0.23
EPB41P11171 DGCR5-201ENST00000399539 862 ntBASIC16.47■□□□□ 0.23
EPB41P11171 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.47■□□□□ 0.23
EPB41P11171 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EPB41P11171 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPB41P11171 CRB3P1-201ENST00000449338 276 ntBASIC16.47■□□□□ 0.23
EPB41P11171 AC022137.2-201ENST00000503482 481 ntBASIC16.47■□□□□ 0.23
EPB41P11171 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.47■□□□□ 0.23
EPB41P11171 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPB41P11171 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.47■□□□□ 0.23
EPB41P11171 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPB41P11171 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
EPB41P11171 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EPB41P11171 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPB41P11171 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.47■□□□□ 0.23
EPB41P11171 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPB41P11171 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPB41P11171 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.47■□□□□ 0.23
EPB41P11171 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.47■□□□□ 0.23
EPB41P11171 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPB41P11171 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPB41P11171 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
EPB41P11171 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
EPB41P11171 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.47■□□□□ 0.23
EPB41P11171 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPB41P11171 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
EPB41P11171 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPB41P11171 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EPB41P11171 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
EPB41P11171 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.46■□□□□ 0.23
EPB41P11171 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.46■□□□□ 0.23
EPB41P11171 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
EPB41P11171 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
EPB41P11171 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
EPB41P11171 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
EPB41P11171 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
EPB41P11171 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EPB41P11171 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
EPB41P11171 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
EPB41P11171 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.46■□□□□ 0.23
EPB41P11171 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms