Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.22□□□□□ -0.29
UBCP0CG48 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
UBCP0CG48 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
UBCP0CG48 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.22□□□□□ -0.29
UBCP0CG48 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.22□□□□□ -0.29
UBCP0CG48 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.22□□□□□ -0.29
UBCP0CG48 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.22□□□□□ -0.29
UBCP0CG48 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.22□□□□□ -0.29
UBCP0CG48 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
UBCP0CG48 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
UBCP0CG48 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.22□□□□□ -0.29
UBCP0CG48 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.22□□□□□ -0.29
UBCP0CG48 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
UBCP0CG48 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
UBCP0CG48 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.22□□□□□ -0.29
UBCP0CG48 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.22□□□□□ -0.29
UBCP0CG48 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.22□□□□□ -0.29
UBCP0CG48 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.22□□□□□ -0.29
UBCP0CG48 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.22□□□□□ -0.29
UBCP0CG48 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.22□□□□□ -0.29
UBCP0CG48 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.22□□□□□ -0.29
UBCP0CG48 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
UBCP0CG48 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.22□□□□□ -0.29
UBCP0CG48 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
UBCP0CG48 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
UBCP0CG48 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
UBCP0CG48 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
UBCP0CG48 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
UBCP0CG48 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
UBCP0CG48 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
UBCP0CG48 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
UBCP0CG48 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.21□□□□□ -0.29
UBCP0CG48 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
UBCP0CG48 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
UBCP0CG48 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
UBCP0CG48 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
UBCP0CG48 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.21□□□□□ -0.29
UBCP0CG48 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 AL928921.2-201ENST00000641325 2442 ntBASIC13.21□□□□□ -0.29
UBCP0CG48 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.21□□□□□ -0.29
UBCP0CG48 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
UBCP0CG48 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.21□□□□□ -0.29
UBCP0CG48 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.21□□□□□ -0.29
UBCP0CG48 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
UBCP0CG48 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
UBCP0CG48 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.21□□□□□ -0.29
UBCP0CG48 AL353779.1-201ENST00000434793 351 ntBASIC13.21□□□□□ -0.29
UBCP0CG48 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.21□□□□□ -0.29
UBCP0CG48 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
UBCP0CG48 DNAJB3-202ENST00000449667 1266 ntBASIC13.21□□□□□ -0.29
UBCP0CG48 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.21□□□□□ -0.29
UBCP0CG48 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.21□□□□□ -0.29
UBCP0CG48 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
UBCP0CG48 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.21□□□□□ -0.29
UBCP0CG48 AC022447.6-201ENST00000515522 438 ntBASIC13.21□□□□□ -0.29
UBCP0CG48 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.21□□□□□ -0.29
UBCP0CG48 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.21□□□□□ -0.29
UBCP0CG48 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.21□□□□□ -0.29
UBCP0CG48 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.21□□□□□ -0.29
UBCP0CG48 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.21□□□□□ -0.29
UBCP0CG48 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.21□□□□□ -0.29
UBCP0CG48 AC004449.1-201ENST00000564240 433 ntBASIC13.21□□□□□ -0.29
UBCP0CG48 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms