Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HTR1AP08908 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HTR1AP08908 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.71□□□□□ -0.21
HTR1AP08908 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HTR1AP08908 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HTR1AP08908 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.71□□□□□ -0.21
HTR1AP08908 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HTR1AP08908 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.71□□□□□ -0.21
HTR1AP08908 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.71□□□□□ -0.21
HTR1AP08908 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.71□□□□□ -0.21
HTR1AP08908 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HTR1AP08908 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HTR1AP08908 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HTR1AP08908 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HTR1AP08908 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HTR1AP08908 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HTR1AP08908 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HTR1AP08908 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HTR1AP08908 AL353705.2-201ENST00000428243 662 ntBASIC13.71□□□□□ -0.21
HTR1AP08908 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.71□□□□□ -0.21
HTR1AP08908 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.71□□□□□ -0.21
HTR1AP08908 TARDBPP1-201ENST00000442013 1203 ntBASIC13.71□□□□□ -0.21
HTR1AP08908 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.71□□□□□ -0.21
HTR1AP08908 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.71□□□□□ -0.21
HTR1AP08908 SLC25A39P2-201ENST00000537614 270 ntBASIC13.71□□□□□ -0.21
HTR1AP08908 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.71□□□□□ -0.21
HTR1AP08908 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.71□□□□□ -0.21
HTR1AP08908 AC106730.1-201ENST00000566722 1090 ntBASIC13.71□□□□□ -0.21
HTR1AP08908 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.71□□□□□ -0.21
HTR1AP08908 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
HTR1AP08908 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
HTR1AP08908 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HTR1AP08908 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HTR1AP08908 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.71□□□□□ -0.21
HTR1AP08908 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
HTR1AP08908 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.71□□□□□ -0.21
HTR1AP08908 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HTR1AP08908 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HTR1AP08908 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HTR1AP08908 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HTR1AP08908 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HTR1AP08908 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
HTR1AP08908 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
HTR1AP08908 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HTR1AP08908 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HTR1AP08908 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.71□□□□□ -0.22
HTR1AP08908 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.71□□□□□ -0.22
HTR1AP08908 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.71□□□□□ -0.22
HTR1AP08908 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HTR1AP08908 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
HTR1AP08908 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HTR1AP08908 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HTR1AP08908 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.7□□□□□ -0.22
HTR1AP08908 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
HTR1AP08908 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HTR1AP08908 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.7□□□□□ -0.22
HTR1AP08908 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.7□□□□□ -0.22
HTR1AP08908 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HTR1AP08908 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
HTR1AP08908 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.7□□□□□ -0.22
HTR1AP08908 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.7□□□□□ -0.22
HTR1AP08908 AC087386.2-201ENST00000623212 4637 ntBASIC13.7□□□□□ -0.22
HTR1AP08908 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.7□□□□□ -0.22
HTR1AP08908 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HTR1AP08908 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
HTR1AP08908 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
HTR1AP08908 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HTR1AP08908 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.7□□□□□ -0.22
HTR1AP08908 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.7□□□□□ -0.22
HTR1AP08908 AL590627.1-203ENST00000421194 1026 ntBASIC13.7□□□□□ -0.22
HTR1AP08908 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.7□□□□□ -0.22
HTR1AP08908 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.7□□□□□ -0.22
HTR1AP08908 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.7□□□□□ -0.22
HTR1AP08908 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.7□□□□□ -0.22
HTR1AP08908 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.7□□□□□ -0.22
HTR1AP08908 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HTR1AP08908 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms