Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.45■□□□□ 0.22
CD4P01730 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CD4P01730 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CD4P01730 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CD4P01730 AC112693.3-201ENST00000624819 1983 ntBASIC16.45■□□□□ 0.22
CD4P01730 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.45■□□□□ 0.22
CD4P01730 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CD4P01730 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CD4P01730 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 AC126365.1-201ENST00000578585 1514 ntBASIC16.45■□□□□ 0.22
CD4P01730 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CD4P01730 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CD4P01730 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 AC136759.1-202ENST00000530858 2194 ntBASIC16.44■□□□□ 0.22
CD4P01730 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
CD4P01730 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.44■□□□□ 0.22
CD4P01730 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CD4P01730 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 C18orf15-201ENST00000623680 2534 ntBASIC16.44■□□□□ 0.22
CD4P01730 KRT8P21-201ENST00000430398 1491 ntBASIC16.44■□□□□ 0.22
CD4P01730 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.44■□□□□ 0.22
CD4P01730 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.44■□□□□ 0.22
CD4P01730 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.44■□□□□ 0.22
CD4P01730 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.44■□□□□ 0.22
CD4P01730 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.44■□□□□ 0.22
CD4P01730 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.44■□□□□ 0.22
CD4P01730 AC007718.1-201ENST00000621078 280 ntBASIC16.44■□□□□ 0.22
CD4P01730 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.44■□□□□ 0.22
CD4P01730 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CD4P01730 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CD4P01730 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CD4P01730 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.44■□□□□ 0.22
CD4P01730 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CD4P01730 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD4P01730 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CD4P01730 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.43■□□□□ 0.22
CD4P01730 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
CD4P01730 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CD4P01730 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CD4P01730 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD4P01730 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.43■□□□□ 0.22
CD4P01730 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.43■□□□□ 0.22
CD4P01730 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.43■□□□□ 0.22
CD4P01730 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD4P01730 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.43■□□□□ 0.22
CD4P01730 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD4P01730 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.43■□□□□ 0.22
CD4P01730 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CD4P01730 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD4P01730 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CD4P01730 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.43■□□□□ 0.22
CD4P01730 AL627389.1-201ENST00000413508 1182 ntBASIC16.43■□□□□ 0.22
CD4P01730 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.43■□□□□ 0.22
CD4P01730 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.43■□□□□ 0.22
CD4P01730 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.43■□□□□ 0.22
CD4P01730 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.43■□□□□ 0.22
CD4P01730 RN7SL67P-201ENST00000492147 296 ntBASIC16.43■□□□□ 0.22
CD4P01730 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.43■□□□□ 0.22
CD4P01730 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.43■□□□□ 0.22
CD4P01730 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.43■□□□□ 0.22
CD4P01730 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.43■□□□□ 0.22
CD4P01730 DNM1P30-201ENST00000563586 452 ntBASIC16.43■□□□□ 0.22
CD4P01730 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CD4P01730 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.43■□□□□ 0.22
CD4P01730 AC009884.2-201ENST00000603110 324 ntBASIC16.43■□□□□ 0.22
CD4P01730 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD4P01730 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.43■□□□□ 0.22
CD4P01730 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CD4P01730 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CD4P01730 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.43■□□□□ 0.22
CD4P01730 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD4P01730 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.43■□□□□ 0.22
CD4P01730 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.43■□□□□ 0.22
CD4P01730 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CD4P01730 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms