Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX2-2O95096 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX2-2O95096 FAM197Y7-201ENST00000432892 766 ntBASIC13.8□□□□□ -0.2
NKX2-2O95096 KRT43P-201ENST00000434019 910 ntBASIC13.8□□□□□ -0.2
NKX2-2O95096 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
NKX2-2O95096 AL590640.2-201ENST00000457038 527 ntBASIC13.8□□□□□ -0.2
NKX2-2O95096 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 ALG3P1-201ENST00000508806 1114 ntBASIC13.8□□□□□ -0.2
NKX2-2O95096 KRT90P-201ENST00000549264 1064 ntBASIC13.8□□□□□ -0.2
NKX2-2O95096 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.8□□□□□ -0.2
NKX2-2O95096 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.8□□□□□ -0.2
NKX2-2O95096 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.8□□□□□ -0.2
NKX2-2O95096 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.8□□□□□ -0.2
NKX2-2O95096 AC012645.4-201ENST00000610691 1061 ntBASIC13.8□□□□□ -0.2
NKX2-2O95096 BX088702.1-201ENST00000610784 235 ntBASIC13.8□□□□□ -0.2
NKX2-2O95096 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.8□□□□□ -0.2
NKX2-2O95096 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NKX2-2O95096 AC006453.4-201ENST00000636949 1252 ntBASIC13.8□□□□□ -0.2
NKX2-2O95096 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.8□□□□□ -0.2
NKX2-2O95096 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX2-2O95096 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
NKX2-2O95096 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 AC097359.2-201ENST00000604992 2389 ntBASIC13.8□□□□□ -0.2
NKX2-2O95096 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.8□□□□□ -0.2
NKX2-2O95096 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX2-2O95096 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.8□□□□□ -0.2
NKX2-2O95096 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX2-2O95096 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NKX2-2O95096 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.79□□□□□ -0.2
NKX2-2O95096 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
NKX2-2O95096 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.79□□□□□ -0.2
NKX2-2O95096 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX2-2O95096 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
NKX2-2O95096 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NKX2-2O95096 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
NKX2-2O95096 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 ARSEP1-201ENST00000420443 635 ntBASIC13.79□□□□□ -0.2
NKX2-2O95096 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.79□□□□□ -0.2
NKX2-2O95096 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX2-2O95096 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX2-2O95096 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.79□□□□□ -0.2
NKX2-2O95096 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
NKX2-2O95096 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.79□□□□□ -0.2
NKX2-2O95096 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.79□□□□□ -0.2
NKX2-2O95096 AC078819.1-201ENST00000547454 765 ntBASIC13.79□□□□□ -0.2
NKX2-2O95096 AC012085.1-201ENST00000548270 765 ntBASIC13.79□□□□□ -0.2
NKX2-2O95096 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX2-2O95096 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.79□□□□□ -0.2
NKX2-2O95096 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.79□□□□□ -0.2
NKX2-2O95096 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX2-2O95096 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX2-2O95096 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.79□□□□□ -0.2
NKX2-2O95096 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
NKX2-2O95096 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
NKX2-2O95096 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
NKX2-2O95096 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NKX2-2O95096 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 PKD1P5-201ENST00000532415 10291 ntBASIC13.78□□□□□ -0.2
NKX2-2O95096 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
NKX2-2O95096 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
NKX2-2O95096 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms