Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.13■□□□□ 0.01
KDELR3O43731 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.13■□□□□ 0.01
KDELR3O43731 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.13■□□□□ 0.01
KDELR3O43731 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.13■□□□□ 0.01
KDELR3O43731 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
KDELR3O43731 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.13■□□□□ 0.01
KDELR3O43731 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.13■□□□□ 0.01
KDELR3O43731 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
KDELR3O43731 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.13■□□□□ 0.01
KDELR3O43731 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.13■□□□□ 0.01
KDELR3O43731 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
KDELR3O43731 GOLGA2P4-201ENST00000441462 777 ntBASIC15.13■□□□□ 0.01
KDELR3O43731 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
KDELR3O43731 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.13■□□□□ 0.01
KDELR3O43731 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.13■□□□□ 0.01
KDELR3O43731 RPSAP36-202ENST00000494591 1261 ntBASIC15.13■□□□□ 0.01
KDELR3O43731 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
KDELR3O43731 FAM86HP-204ENST00000513466 959 ntBASIC15.13■□□□□ 0.01
KDELR3O43731 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
KDELR3O43731 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.13■□□□□ 0.01
KDELR3O43731 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.13■□□□□ 0.01
KDELR3O43731 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.13■□□□□ 0.01
KDELR3O43731 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.13■□□□□ 0.01
KDELR3O43731 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.13■□□□□ 0.01
KDELR3O43731 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.13■□□□□ 0.01
KDELR3O43731 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.13■□□□□ 0.01
KDELR3O43731 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
KDELR3O43731 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.13■□□□□ 0.01
KDELR3O43731 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.13■□□□□ 0.01
KDELR3O43731 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.13■□□□□ 0.01
KDELR3O43731 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.13■□□□□ 0.01
KDELR3O43731 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
KDELR3O43731 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.13■□□□□ 0.01
KDELR3O43731 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDELR3O43731 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.12■□□□□ 0.01
KDELR3O43731 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.12■□□□□ 0.01
KDELR3O43731 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDELR3O43731 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDELR3O43731 SHC1P1-201ENST00000425230 1745 ntBASIC15.12■□□□□ 0.01
KDELR3O43731 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.12■□□□□ 0.01
KDELR3O43731 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KDELR3O43731 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.12■□□□□ 0.01
KDELR3O43731 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDELR3O43731 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
KDELR3O43731 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.12■□□□□ 0.01
KDELR3O43731 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDELR3O43731 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
KDELR3O43731 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.12■□□□□ 0.01
KDELR3O43731 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
KDELR3O43731 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDELR3O43731 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDELR3O43731 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KDELR3O43731 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDELR3O43731 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
KDELR3O43731 BTBD6P1-201ENST00000412176 1267 ntBASIC15.12■□□□□ 0.01
KDELR3O43731 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.12■□□□□ 0.01
KDELR3O43731 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
KDELR3O43731 MTX1P1-201ENST00000440904 838 ntBASIC15.12■□□□□ 0.01
KDELR3O43731 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KDELR3O43731 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.12■□□□□ 0.01
KDELR3O43731 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.12■□□□□ 0.01
KDELR3O43731 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.12■□□□□ 0.01
KDELR3O43731 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.12■□□□□ 0.01
KDELR3O43731 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.12■□□□□ 0.01
KDELR3O43731 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.12■□□□□ 0.01
KDELR3O43731 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.12■□□□□ 0.01
KDELR3O43731 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.12■□□□□ 0.01
KDELR3O43731 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.12■□□□□ 0.01
KDELR3O43731 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.12■□□□□ 0.01
KDELR3O43731 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDELR3O43731 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDELR3O43731 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.12■□□□□ 0.01
KDELR3O43731 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDELR3O43731 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.12■□□□□ 0.01
KDELR3O43731 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDELR3O43731 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
KDELR3O43731 REXO1L6P-201ENST00000603433 1515 ntBASIC15.12■□□□□ 0.01
KDELR3O43731 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDELR3O43731 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
KDELR3O43731 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms