Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 AL391825.1-201ENST00000457671 1364 ntBASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 AL360270.3-201ENST00000609118 1348 ntBASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 SOCS2P1-201ENST00000417727 557 ntBASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 AL353779.1-201ENST00000434793 351 ntBASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 AP001582.1-201ENST00000525856 295 ntBASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 AC120045.2-201ENST00000567334 178 ntBASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 AC099568.2-201ENST00000609194 695 ntBASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 AC007431.3-201ENST00000623221 587 ntBASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 BX539320.1-201ENST00000623759 877 ntBASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 HFE2-206ENST00000634927 506 ntTSL 4 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 REXO1L5P-201ENST00000622260 2098 ntBASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 CICP14-201ENST00000629111 2732 ntBASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRGV1A0A0A0MS02 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRGV1A0A0A0MS02 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms