Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 AL645937.2-201ENST00000396808 931 ntBASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 AC236430.1-201ENST00000402231 743 ntBASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 PIN1P1-201ENST00000412108 996 ntBASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 WDR53-203ENST00000429115 683 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 OARD1-208ENST00000469104 704 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 TERF1P3-201ENST00000505638 1227 ntBASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 AC120045.2-201ENST00000567334 178 ntBASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 YTHDF3-AS1-201ENST00000603538 718 ntBASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 AC007431.3-201ENST00000623221 587 ntBASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 AL138799.1-201ENST00000448213 1675 ntBASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 MBLAC2-202ENST00000514906 1936 ntBASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 AMT-232ENST00000636199 1546 ntTSL 5 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC11.38□□□□□ -0.59
HLA-DRB4X5D2U9 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 AC136759.1-202ENST00000530858 2194 ntBASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 MIR661-201ENST00000384842 89 ntBASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 C1QBPP1-201ENST00000400117 770 ntBASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 NUS1P3-201ENST00000423502 862 ntBASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 AC092552.1-201ENST00000547243 906 ntBASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 CDK4-206ENST00000549606 558 ntTSL 2 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 AP000845.1-201ENST00000581677 2131 ntBASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC11.37□□□□□ -0.59
HLA-DRB4X5D2U9 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms