Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC093909.3-201ENST00000504783 336 ntBASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 ALOX12P2-203ENST00000570921 1945 ntBASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.92■□□□□ 0.46
ZC3H4Q9UPT8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 AC004554.1-201ENST00000422830 1468 ntBASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 TLE1P1-201ENST00000422965 589 ntBASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 CICP12-201ENST00000455801 843 ntBASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 AC140113.1-201ENST00000603467 169 ntBASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 AC006548.2-201ENST00000605217 529 ntBASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ZC3H4Q9UPT8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 AC018629.1-201ENST00000623381 1736 ntBASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 HLA-DQB1-202ENST00000399079 1501 ntBASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 AHCYP4-201ENST00000419201 1315 ntBASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 KRT18P36-201ENST00000411618 1276 ntBASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 RNA5SP417-201ENST00000516459 108 ntBASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ZC3H4Q9UPT8 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
ZC3H4Q9UPT8 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ZC3H4Q9UPT8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
ZC3H4Q9UPT8 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms