Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 ACTBP8-201ENST00000403258 1108 ntBASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 Z93015.1-201ENST00000451718 390 ntBASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 FAM86HP-204ENST00000513466 959 ntBASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 MIR3615-201ENST00000581999 87 ntBASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 ECM1P1-201ENST00000604092 1279 ntBASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 TNRC18P2-201ENST00000417666 2714 ntBASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPA1Q9UND3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 BTBD6P1-201ENST00000412176 1267 ntBASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 AC004066.1-201ENST00000502488 802 ntBASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 AL606495.2-201ENST00000605867 535 ntBASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 AL354989.2-201ENST00000435838 1540 ntBASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA1Q9UND3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA1Q9UND3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA1Q9UND3 AGAP7P-201ENST00000582299 2062 ntBASIC13.87□□□□□ -0.19
NPIPA1Q9UND3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NPIPA1Q9UND3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA1Q9UND3 AGAP14-201ENST00000624701 2060 ntBASIC13.87□□□□□ -0.19
NPIPA1Q9UND3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.87□□□□□ -0.19
NPIPA1Q9UND3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NPIPA1Q9UND3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms