Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 AC003102.2-201ENST00000589195 1469 ntBASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 AL133338.1-201ENST00000565695 1517 ntBASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 AL109954.1-202ENST00000564051 2148 ntBASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 AC020910.5-201ENST00000623668 1865 ntBASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 AC091804.1-201ENST00000486888 567 ntBASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 AC103810.3-201ENST00000583567 96 ntBASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 AL136301.1-201ENST00000615830 422 ntBASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 AC022532.1-201ENST00000624563 1728 ntBASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLCF1Q9UBD9 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 AC126915.1-201ENST00000522847 1038 ntBASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 AC005730.2-201ENST00000564549 1184 ntBASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 AC007663.3-201ENST00000609632 465 ntBASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CLCF1Q9UBD9 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms