Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 AL359183.1-201ENST00000623796 2132 ntBASIC13.15□□□□□ -0.3
CPNE2Q96FN4 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
CPNE2Q96FN4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
CPNE2Q96FN4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CPNE2Q96FN4 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 KRT18P64-201ENST00000434946 1219 ntBASIC13.14□□□□□ -0.31
CPNE2Q96FN4 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.14□□□□□ -0.31
CPNE2Q96FN4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 ZNF890P-202ENST00000530367 1156 ntBASIC13.14□□□□□ -0.31
CPNE2Q96FN4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 AC010336.2-201ENST00000564226 506 ntBASIC13.14□□□□□ -0.31
CPNE2Q96FN4 LINC01115-203ENST00000606068 577 ntBASIC13.14□□□□□ -0.31
CPNE2Q96FN4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 LILRP1-201ENST00000444199 1370 ntBASIC13.14□□□□□ -0.31
CPNE2Q96FN4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 CICP8-201ENST00000455800 2813 ntBASIC13.14□□□□□ -0.31
CPNE2Q96FN4 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
CPNE2Q96FN4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CPNE2Q96FN4 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms