Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 RNA5SP486-201ENST00000515961 83 ntBASIC15.88■□□□□ 0.13
ATP2A3Q93084 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 AC078819.1-201ENST00000547454 765 ntBASIC15.88■□□□□ 0.13
ATP2A3Q93084 AC012085.1-201ENST00000548270 765 ntBASIC15.88■□□□□ 0.13
ATP2A3Q93084 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 AC126365.1-201ENST00000578585 1514 ntBASIC15.88■□□□□ 0.13
ATP2A3Q93084 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.88■□□□□ 0.13
ATP2A3Q93084 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ATP2A3Q93084 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ATP2A3Q93084 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP2A3Q93084 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.87■□□□□ 0.13
ATP2A3Q93084 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ATP2A3Q93084 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP2A3Q93084 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP2A3Q93084 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
ATP2A3Q93084 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
ATP2A3Q93084 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP2A3Q93084 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP2A3Q93084 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP2A3Q93084 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP2A3Q93084 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP2A3Q93084 RNU1-114P-201ENST00000365297 166 ntBASIC15.87■□□□□ 0.13
ATP2A3Q93084 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ATP2A3Q93084 KLF2P2-201ENST00000416807 1039 ntBASIC15.87■□□□□ 0.13
ATP2A3Q93084 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ATP2A3Q93084 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.87■□□□□ 0.13
ATP2A3Q93084 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.87■□□□□ 0.13
ATP2A3Q93084 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP2A3Q93084 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.87■□□□□ 0.13
ATP2A3Q93084 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.87■□□□□ 0.13
ATP2A3Q93084 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.87■□□□□ 0.13
ATP2A3Q93084 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
ATP2A3Q93084 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.87■□□□□ 0.13
ATP2A3Q93084 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.87■□□□□ 0.13
ATP2A3Q93084 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.87■□□□□ 0.13
ATP2A3Q93084 AC091271.1-201ENST00000611877 1162 ntBASIC15.87■□□□□ 0.13
ATP2A3Q93084 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.87■□□□□ 0.13
ATP2A3Q93084 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP2A3Q93084 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
ATP2A3Q93084 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.87■□□□□ 0.13
ATP2A3Q93084 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP2A3Q93084 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
ATP2A3Q93084 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP2A3Q93084 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP2A3Q93084 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.87■□□□□ 0.13
ATP2A3Q93084 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
ATP2A3Q93084 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ATP2A3Q93084 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ATP2A3Q93084 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATP2A3Q93084 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATP2A3Q93084 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 CD8B2-202ENST00000417670 633 ntBASIC15.86■□□□□ 0.13
ATP2A3Q93084 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ATP2A3Q93084 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATP2A3Q93084 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 AC243960.2-201ENST00000600996 747 ntBASIC15.86■□□□□ 0.13
ATP2A3Q93084 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 AC244093.1-201ENST00000610837 814 ntBASIC15.86■□□□□ 0.13
ATP2A3Q93084 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATP2A3Q93084 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
ATP2A3Q93084 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
ATP2A3Q93084 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ATP2A3Q93084 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms