Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 RPL13AP20-201ENST00000459725 609 ntBASIC14.24□□□□□ -0.13
TM9SF4Q92544 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 AL606495.2-201ENST00000605867 535 ntBASIC14.24□□□□□ -0.13
TM9SF4Q92544 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 AL138799.1-201ENST00000448213 1675 ntBASIC14.23□□□□□ -0.13
TM9SF4Q92544 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 AL161772.1-201ENST00000610494 4412 ntBASIC14.23□□□□□ -0.13
TM9SF4Q92544 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 AC006001.1-201ENST00000325130 474 ntBASIC14.23□□□□□ -0.13
TM9SF4Q92544 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 AC245100.3-201ENST00000441281 285 ntBASIC14.23□□□□□ -0.13
TM9SF4Q92544 KRT8P13-201ENST00000463294 1010 ntBASIC14.23□□□□□ -0.13
TM9SF4Q92544 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 GNRHR2-203ENST00000581100 1187 ntBASIC14.23□□□□□ -0.13
TM9SF4Q92544 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 AL022328.3-201ENST00000607943 679 ntBASIC14.23□□□□□ -0.13
TM9SF4Q92544 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 AC018892.3-201ENST00000623986 2499 ntBASIC14.23□□□□□ -0.13
TM9SF4Q92544 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TM9SF4Q92544 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TM9SF4Q92544 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.22□□□□□ -0.13
TM9SF4Q92544 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms