Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 HCG4B-203ENST00000450128 991 ntBASIC11.26□□□□□ -0.61
NUP35Q8NFH5 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 TP73-AS1-207ENST00000624167 988 ntBASIC11.26□□□□□ -0.61
NUP35Q8NFH5 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 AL365181.3-201ENST00000605886 3222 ntBASIC11.26□□□□□ -0.61
NUP35Q8NFH5 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
NUP35Q8NFH5 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 CBR1-202ENST00000399191 838 ntTSL 3 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 AC142381.1-201ENST00000426099 345 ntBASIC11.25□□□□□ -0.61
NUP35Q8NFH5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 AC025181.2-201ENST00000606994 802 ntBASIC11.25□□□□□ -0.61
NUP35Q8NFH5 IFNL4P1-201ENST00000607083 540 ntBASIC11.25□□□□□ -0.61
NUP35Q8NFH5 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 MEX3B-202ENST00000558133 4333 ntBASIC11.25□□□□□ -0.61
NUP35Q8NFH5 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
NUP35Q8NFH5 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms