Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 AC007292.2-201ENST00000593524 1812 ntBASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 ACKR1-201ENST00000368121 1240 ntBASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 BCYRN1-201ENST00000418539 200 ntBASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 RN7SL560P-201ENST00000577943 264 ntBASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 AC243960.2-201ENST00000600996 747 ntBASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 AC091271.1-201ENST00000611877 1162 ntBASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 MYO15B-237ENST00000642007 4893 ntBASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC33Q8N5R6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC33Q8N5R6 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms