Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 AC005593.1-201ENST00000624894 515 ntBASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 POM121L4P-202ENST00000427789 1891 ntBASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.65□□□□□ -0.23
CROCCP3Q8IVE0 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
CROCCP3Q8IVE0 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 GHSR-202ENST00000427970 912 ntBASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 ATP5G2P1-201ENST00000433580 426 ntBASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 AC098859.1-201ENST00000502915 1238 ntBASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 AC022447.6-201ENST00000515522 438 ntBASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 SPTSSB-204ENST00000617024 1292 ntBASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.64□□□□□ -0.23
CROCCP3Q8IVE0 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 AP000845.1-201ENST00000581677 2131 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms