Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 MYCLP2-201ENST00000449268 967 ntBASIC15.66■□□□□ 0.1
RFX6Q8HWS3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.66■□□□□ 0.1
RFX6Q8HWS3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 AC133539.2-201ENST00000604757 467 ntBASIC15.66■□□□□ 0.1
RFX6Q8HWS3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 KRT8P14-201ENST00000414254 1442 ntBASIC15.66■□□□□ 0.1
RFX6Q8HWS3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 AP001267.2-201ENST00000532619 2086 ntBASIC15.66■□□□□ 0.1
RFX6Q8HWS3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RFX6Q8HWS3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 AL391825.1-201ENST00000457671 1364 ntBASIC15.65■□□□□ 0.1
RFX6Q8HWS3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 AC087499.6-201ENST00000411576 835 ntBASIC15.65■□□□□ 0.1
RFX6Q8HWS3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 AC022616.1-201ENST00000518688 554 ntBASIC15.65■□□□□ 0.1
RFX6Q8HWS3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.65■□□□□ 0.1
RFX6Q8HWS3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
RFX6Q8HWS3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.64■□□□□ 0.1
RFX6Q8HWS3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RFX6Q8HWS3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms