Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 AC022616.1-201ENST00000518688 554 ntBASIC13.9□□□□□ -0.18
VRK2Q86Y07 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 AC133539.2-201ENST00000604757 467 ntBASIC13.9□□□□□ -0.18
VRK2Q86Y07 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.9□□□□□ -0.18
VRK2Q86Y07 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VRK2Q86Y07 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
VRK2Q86Y07 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
VRK2Q86Y07 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
VRK2Q86Y07 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.89□□□□□ -0.19
VRK2Q86Y07 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK2Q86Y07 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
VRK2Q86Y07 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 329.7 ms