Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 AC138035.3-201ENST00000622706 2791 ntBASIC15.16■□□□□ 0.02
C12orf40Q86WS4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 FAM58BP-201ENST00000439056 645 ntBASIC15.16■□□□□ 0.02
C12orf40Q86WS4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 RCC2P8-201ENST00000502779 1035 ntBASIC15.16■□□□□ 0.02
C12orf40Q86WS4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 ALG3P1-201ENST00000508806 1114 ntBASIC15.16■□□□□ 0.02
C12orf40Q86WS4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 AC131206.1-201ENST00000538078 1211 ntBASIC15.16■□□□□ 0.02
C12orf40Q86WS4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 AL161670.2-201ENST00000557650 1227 ntBASIC15.16■□□□□ 0.02
C12orf40Q86WS4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 AL132994.2-201ENST00000603120 687 ntBASIC15.16■□□□□ 0.02
C12orf40Q86WS4 AC079336.7-201ENST00000623428 1078 ntBASIC15.16■□□□□ 0.02
C12orf40Q86WS4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 AC068418.2-201ENST00000577309 3703 ntBASIC15.16■□□□□ 0.02
C12orf40Q86WS4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C12orf40Q86WS4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.15■□□□□ 0.02
C12orf40Q86WS4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 AC091951.1-201ENST00000512854 2465 ntBASIC15.15■□□□□ 0.02
C12orf40Q86WS4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 ISCA2P1-201ENST00000425548 448 ntBASIC15.15■□□□□ 0.02
C12orf40Q86WS4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 AC012441.2-201ENST00000444843 739 ntBASIC15.15■□□□□ 0.02
C12orf40Q86WS4 AL596276.2-201ENST00000447525 331 ntBASIC15.15■□□□□ 0.02
C12orf40Q86WS4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 AC103988.2-201ENST00000561804 725 ntBASIC15.15■□□□□ 0.02
C12orf40Q86WS4 MIR3907-201ENST00000579424 151 ntBASIC15.15■□□□□ 0.02
C12orf40Q86WS4 RN7SL190P-201ENST00000582519 257 ntBASIC15.15■□□□□ 0.02
C12orf40Q86WS4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C12orf40Q86WS4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
C12orf40Q86WS4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms