Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 HNRNPUP1-201ENST00000554987 333 ntBASIC12.54□□□□□ -0.4
ZNF546Q86UE3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.54□□□□□ -0.4
ZNF546Q86UE3 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 AL607033.1-201ENST00000623900 1599 ntBASIC12.53□□□□□ -0.4
ZNF546Q86UE3 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 RPS8P6-201ENST00000426177 609 ntBASIC12.53□□□□□ -0.4
ZNF546Q86UE3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 AF186996.4-201ENST00000467186 377 ntBASIC12.53□□□□□ -0.4
ZNF546Q86UE3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 AC061975.2-201ENST00000581722 295 ntBASIC12.53□□□□□ -0.4
ZNF546Q86UE3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 AGGF1P1-201ENST00000509500 2073 ntBASIC12.53□□□□□ -0.4
ZNF546Q86UE3 AC111170.3-201ENST00000624282 2464 ntBASIC12.53□□□□□ -0.4
ZNF546Q86UE3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.53□□□□□ -0.4
ZNF546Q86UE3 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ZNF546Q86UE3 AL136982.4-201ENST00000437689 1740 ntBASIC12.52□□□□□ -0.41
ZNF546Q86UE3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms