Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 API5-208ENST00000531273 1868 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC8.98□□□□□ -0.97
VPS13BQ7Z7G8 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 SURF4-203ENST00000371991 715 ntTSL 3 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 AC108724.1-201ENST00000481669 352 ntBASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 RNA5SP417-201ENST00000516459 108 ntBASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 IGHV1-12-201ENST00000518307 205 ntBASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 AC004686.1-201ENST00000605113 538 ntBASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 AC083801.1-201ENST00000491689 358 ntBASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 RN7SL81P-201ENST00000493781 261 ntBASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 RN7SL665P-201ENST00000578793 300 ntBASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 BCAS2P2-201ENST00000425064 674 ntBASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 AC138701.2-201ENST00000553634 226 ntBASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 DUT-207ENST00000559416 635 ntTSL 2 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS13BQ7Z7G8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 FAM90A21P-201ENST00000510875 1396 ntBASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 FAM90A15P-201ENST00000514465 1395 ntBASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 FAM90A6P-201ENST00000515148 1394 ntBASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 FAM90A16P-201ENST00000526662 1395 ntBASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 FAM90A9P-201ENST00000527940 1395 ntBASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 FAM90A5P-201ENST00000528738 1395 ntBASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 FAM90A14P-201ENST00000530386 1395 ntBASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 FAM90A13P-201ENST00000534703 1395 ntBASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.97
VPS13BQ7Z7G8 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC8.96□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms