Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 AC022210.1-201ENST00000449856 793 ntBASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 ST20-AS1-201ENST00000560255 4223 ntBASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 AL035456.1-201ENST00000456064 1369 ntBASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 AL391825.1-201ENST00000457671 1364 ntBASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 REXO1L4P-201ENST00000605109 1937 ntBASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 AC097376.2-205ENST00000610159 5334 ntBASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CCNI2Q6ZMN8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 RNA5SP410-201ENST00000516285 106 ntBASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 AL844908.2-201ENST00000609461 460 ntBASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 TEX28P1-201ENST00000613479 1221 ntBASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 TEX28P2-201ENST00000617764 1221 ntBASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 PPT1-213ENST00000641319 2388 ntBASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCNI2Q6ZMN8 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms