Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 MIR557-201ENST00000385239 98 ntBASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 BANF1P3-201ENST00000412556 261 ntBASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 AL807761.2-201ENST00000422849 729 ntBASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 AL627422.1-201ENST00000434104 580 ntBASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 XBP1P1-201ENST00000436573 652 ntBASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 DUTP3-201ENST00000450025 415 ntBASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 AC018463.1-201ENST00000456674 917 ntBASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 IGHV3-37-201ENST00000518544 340 ntBASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 AC131206.1-201ENST00000538078 1211 ntBASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 AC023090.2-201ENST00000625182 2110 ntBASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.56□□□□□ -0.08
LYSMD4Q5XG99 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 AC092850.2-201ENST00000623821 2697 ntBASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 AC097065.1-201ENST00000425737 517 ntBASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 AC012362.1-201ENST00000434906 739 ntBASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 RPSAP15-201ENST00000448168 861 ntBASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 MIR4522-201ENST00000584932 87 ntBASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 RPL17P45-201ENST00000586289 509 ntBASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 SIGLEC18P-201ENST00000602271 909 ntBASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LYSMD4Q5XG99 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms