Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USH1GQ495M9 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.18■□□□□ 0.34
USH1GQ495M9 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USH1GQ495M9 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USH1GQ495M9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USH1GQ495M9 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
USH1GQ495M9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
USH1GQ495M9 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.17■□□□□ 0.34
USH1GQ495M9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
USH1GQ495M9 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
USH1GQ495M9 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USH1GQ495M9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USH1GQ495M9 AL133338.1-201ENST00000565695 1517 ntBASIC17.17■□□□□ 0.34
USH1GQ495M9 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
USH1GQ495M9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USH1GQ495M9 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USH1GQ495M9 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.17■□□□□ 0.34
USH1GQ495M9 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
USH1GQ495M9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USH1GQ495M9 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USH1GQ495M9 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.17■□□□□ 0.34
USH1GQ495M9 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USH1GQ495M9 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.17■□□□□ 0.34
USH1GQ495M9 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.17■□□□□ 0.34
USH1GQ495M9 AC004898.1-201ENST00000451057 766 ntBASIC17.17■□□□□ 0.34
USH1GQ495M9 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.17■□□□□ 0.34
USH1GQ495M9 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USH1GQ495M9 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.17■□□□□ 0.34
USH1GQ495M9 AC103810.3-201ENST00000583567 96 ntBASIC17.17■□□□□ 0.34
USH1GQ495M9 AL451050.2-201ENST00000606967 682 ntBASIC17.17■□□□□ 0.34
USH1GQ495M9 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USH1GQ495M9 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.17■□□□□ 0.34
USH1GQ495M9 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
USH1GQ495M9 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USH1GQ495M9 CICP23-201ENST00000605013 2741 ntBASIC17.17■□□□□ 0.34
USH1GQ495M9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.17■□□□□ 0.34
USH1GQ495M9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.17■□□□□ 0.34
USH1GQ495M9 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.17■□□□□ 0.34
USH1GQ495M9 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.17■□□□□ 0.34
USH1GQ495M9 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USH1GQ495M9 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.17■□□□□ 0.34
USH1GQ495M9 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.16■□□□□ 0.34
USH1GQ495M9 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.16■□□□□ 0.34
USH1GQ495M9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.16■□□□□ 0.34
USH1GQ495M9 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
USH1GQ495M9 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.16■□□□□ 0.34
USH1GQ495M9 E2F3P2-201ENST00000447755 1422 ntBASIC17.16■□□□□ 0.34
USH1GQ495M9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.16■□□□□ 0.34
USH1GQ495M9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.16■□□□□ 0.34
USH1GQ495M9 AC103702.1-201ENST00000548801 2630 ntBASIC17.16■□□□□ 0.34
USH1GQ495M9 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
USH1GQ495M9 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.16■□□□□ 0.34
USH1GQ495M9 AC021723.1-201ENST00000486306 515 ntBASIC17.16■□□□□ 0.34
USH1GQ495M9 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.16■□□□□ 0.34
USH1GQ495M9 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.16■□□□□ 0.34
USH1GQ495M9 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.16■□□□□ 0.34
USH1GQ495M9 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.16■□□□□ 0.34
USH1GQ495M9 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.16■□□□□ 0.34
USH1GQ495M9 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
USH1GQ495M9 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
USH1GQ495M9 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
USH1GQ495M9 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
USH1GQ495M9 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
USH1GQ495M9 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.16■□□□□ 0.34
USH1GQ495M9 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
USH1GQ495M9 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.16■□□□□ 0.34
USH1GQ495M9 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
USH1GQ495M9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
USH1GQ495M9 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USH1GQ495M9 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USH1GQ495M9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.15■□□□□ 0.34
USH1GQ495M9 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
USH1GQ495M9 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.15■□□□□ 0.34
USH1GQ495M9 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USH1GQ495M9 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
USH1GQ495M9 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
USH1GQ495M9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USH1GQ495M9 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USH1GQ495M9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USH1GQ495M9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USH1GQ495M9 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms