Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CD47Q08722 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CD47Q08722 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.01□□□□□ -0.17
CD47Q08722 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CD47Q08722 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CD47Q08722 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.01□□□□□ -0.17
CD47Q08722 HLA-J-203ENST00000494367 1087 ntBASIC14.01□□□□□ -0.17
CD47Q08722 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
CD47Q08722 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.01□□□□□ -0.17
CD47Q08722 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.01□□□□□ -0.17
CD47Q08722 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.01□□□□□ -0.17
CD47Q08722 AC025678.2-201ENST00000562061 970 ntBASIC14.01□□□□□ -0.17
CD47Q08722 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.01□□□□□ -0.17
CD47Q08722 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.01□□□□□ -0.17
CD47Q08722 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CD47Q08722 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 AC005562.1-201ENST00000583030 3219 ntBASIC14.01□□□□□ -0.17
CD47Q08722 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.01□□□□□ -0.17
CD47Q08722 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.01□□□□□ -0.17
CD47Q08722 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CD47Q08722 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD47Q08722 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.01□□□□□ -0.17
CD47Q08722 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CD47Q08722 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14□□□□□ -0.17
CD47Q08722 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14□□□□□ -0.17
CD47Q08722 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CD47Q08722 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14□□□□□ -0.17
CD47Q08722 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14□□□□□ -0.17
CD47Q08722 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14□□□□□ -0.17
CD47Q08722 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CD47Q08722 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14□□□□□ -0.17
CD47Q08722 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14□□□□□ -0.17
CD47Q08722 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CD47Q08722 AL080243.2-201ENST00000418783 582 ntBASIC14□□□□□ -0.17
CD47Q08722 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14□□□□□ -0.17
CD47Q08722 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14□□□□□ -0.17
CD47Q08722 HIST3H2BA-201ENST00000436555 524 ntBASIC14□□□□□ -0.17
CD47Q08722 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14□□□□□ -0.17
CD47Q08722 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14□□□□□ -0.17
CD47Q08722 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CD47Q08722 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CD47Q08722 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14□□□□□ -0.17
CD47Q08722 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14□□□□□ -0.17
CD47Q08722 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14□□□□□ -0.17
CD47Q08722 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
CD47Q08722 AC087386.2-201ENST00000623212 4637 ntBASIC14□□□□□ -0.17
CD47Q08722 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
CD47Q08722 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14□□□□□ -0.17
CD47Q08722 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CD47Q08722 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.99□□□□□ -0.17
CD47Q08722 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.99□□□□□ -0.17
CD47Q08722 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CD47Q08722 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.99□□□□□ -0.17
CD47Q08722 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD47Q08722 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CD47Q08722 TUBB3P1-201ENST00000405796 1332 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms