Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC10.76□□□□□ -0.69
UBE2D3P61077 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC10.76□□□□□ -0.69
UBE2D3P61077 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC10.76□□□□□ -0.69
UBE2D3P61077 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC10.76□□□□□ -0.69
UBE2D3P61077 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC10.76□□□□□ -0.69
UBE2D3P61077 HNRNPA3P5-201ENST00000455201 833 ntBASIC10.76□□□□□ -0.69
UBE2D3P61077 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC10.76□□□□□ -0.69
UBE2D3P61077 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC10.76□□□□□ -0.69
UBE2D3P61077 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC10.76□□□□□ -0.69
UBE2D3P61077 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC10.76□□□□□ -0.69
UBE2D3P61077 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
UBE2D3P61077 MPI-209ENST00000564003 1195 ntTSL 2 BASIC10.76□□□□□ -0.69
UBE2D3P61077 AC092337.1-201ENST00000568699 1129 ntBASIC10.76□□□□□ -0.69
UBE2D3P61077 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC10.76□□□□□ -0.69
UBE2D3P61077 LSM12-202ENST00000585388 942 ntTSL 3 BASIC10.76□□□□□ -0.69
UBE2D3P61077 AL158211.3-201ENST00000607385 239 ntBASIC10.76□□□□□ -0.69
UBE2D3P61077 AL844908.2-201ENST00000609461 460 ntBASIC10.76□□□□□ -0.69
UBE2D3P61077 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
UBE2D3P61077 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
UBE2D3P61077 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
UBE2D3P61077 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 AC011474.4-201ENST00000623523 2076 ntBASIC10.76□□□□□ -0.69
UBE2D3P61077 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC10.76□□□□□ -0.69
UBE2D3P61077 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
UBE2D3P61077 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC10.76□□□□□ -0.69
UBE2D3P61077 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC10.76□□□□□ -0.69
UBE2D3P61077 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
UBE2D3P61077 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC10.76□□□□□ -0.69
UBE2D3P61077 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC10.76□□□□□ -0.69
UBE2D3P61077 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
UBE2D3P61077 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC10.76□□□□□ -0.69
UBE2D3P61077 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
UBE2D3P61077 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC10.75□□□□□ -0.69
UBE2D3P61077 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
UBE2D3P61077 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D3P61077 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D3P61077 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
UBE2D3P61077 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 MPI-203ENST00000535694 1523 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D3P61077 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
UBE2D3P61077 NUTM2HP-201ENST00000442076 2498 ntBASIC10.75□□□□□ -0.69
UBE2D3P61077 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
UBE2D3P61077 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D3P61077 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC10.75□□□□□ -0.69
UBE2D3P61077 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D3P61077 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D3P61077 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
UBE2D3P61077 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
UBE2D3P61077 MIR1233-2-201ENST00000408138 82 ntBASIC10.75□□□□□ -0.69
UBE2D3P61077 MIR1233-1-201ENST00000408722 82 ntBASIC10.75□□□□□ -0.69
UBE2D3P61077 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
UBE2D3P61077 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC10.75□□□□□ -0.69
UBE2D3P61077 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC10.75□□□□□ -0.69
UBE2D3P61077 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
UBE2D3P61077 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D3P61077 AC004066.1-201ENST00000502488 802 ntBASIC10.75□□□□□ -0.69
UBE2D3P61077 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC10.75□□□□□ -0.69
UBE2D3P61077 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D3P61077 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC10.75□□□□□ -0.69
UBE2D3P61077 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D3P61077 INO80C-210ENST00000590757 595 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D3P61077 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC10.75□□□□□ -0.69
UBE2D3P61077 TEX48-202ENST00000612244 662 ntTSL 3 BASIC10.75□□□□□ -0.69
UBE2D3P61077 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
UBE2D3P61077 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC10.75□□□□□ -0.69
UBE2D3P61077 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC10.75□□□□□ -0.69
UBE2D3P61077 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
UBE2D3P61077 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 LILRP1-201ENST00000444199 1370 ntBASIC10.75□□□□□ -0.69
UBE2D3P61077 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC10.75□□□□□ -0.69
UBE2D3P61077 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
UBE2D3P61077 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms