Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
EPHB3P54753 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
EPHB3P54753 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.57■□□□□ 0.08
EPHB3P54753 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
EPHB3P54753 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.57■□□□□ 0.08
EPHB3P54753 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.57■□□□□ 0.08
EPHB3P54753 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.57■□□□□ 0.08
EPHB3P54753 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
EPHB3P54753 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
EPHB3P54753 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
EPHB3P54753 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.57■□□□□ 0.08
EPHB3P54753 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
EPHB3P54753 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
EPHB3P54753 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
EPHB3P54753 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
EPHB3P54753 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
EPHB3P54753 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
EPHB3P54753 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
EPHB3P54753 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
EPHB3P54753 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.57■□□□□ 0.08
EPHB3P54753 KLF2P1-201ENST00000447438 1042 ntBASIC15.57■□□□□ 0.08
EPHB3P54753 CICP12-201ENST00000455801 843 ntBASIC15.57■□□□□ 0.08
EPHB3P54753 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.57■□□□□ 0.08
EPHB3P54753 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.57■□□□□ 0.08
EPHB3P54753 AC131206.1-201ENST00000538078 1211 ntBASIC15.57■□□□□ 0.08
EPHB3P54753 AC105129.2-201ENST00000559536 390 ntBASIC15.57■□□□□ 0.08
EPHB3P54753 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.57■□□□□ 0.08
EPHB3P54753 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.57■□□□□ 0.08
EPHB3P54753 SNORD3B-2-202ENST00000571722 791 ntBASIC15.57■□□□□ 0.08
EPHB3P54753 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
EPHB3P54753 AL132994.2-201ENST00000603120 687 ntBASIC15.57■□□□□ 0.08
EPHB3P54753 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.57■□□□□ 0.08
EPHB3P54753 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
EPHB3P54753 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
EPHB3P54753 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.57■□□□□ 0.08
EPHB3P54753 AC008132.1-202ENST00000342005 1389 ntBASIC15.57■□□□□ 0.08
EPHB3P54753 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
EPHB3P54753 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.57■□□□□ 0.08
EPHB3P54753 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
EPHB3P54753 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.57■□□□□ 0.08
EPHB3P54753 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.57■□□□□ 0.08
EPHB3P54753 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
EPHB3P54753 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
EPHB3P54753 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
EPHB3P54753 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.57■□□□□ 0.08
EPHB3P54753 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
EPHB3P54753 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
EPHB3P54753 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.57■□□□□ 0.08
EPHB3P54753 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
EPHB3P54753 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.56■□□□□ 0.08
EPHB3P54753 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
EPHB3P54753 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 AC008741.2-201ENST00000612792 3115 ntBASIC15.56■□□□□ 0.08
EPHB3P54753 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 RN7SKP214-201ENST00000364208 315 ntBASIC15.56■□□□□ 0.08
EPHB3P54753 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
EPHB3P54753 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.56■□□□□ 0.08
EPHB3P54753 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.56■□□□□ 0.08
EPHB3P54753 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 IMP3P2-201ENST00000489760 475 ntBASIC15.56■□□□□ 0.08
EPHB3P54753 HLA-J-204ENST00000495278 958 ntBASIC15.56■□□□□ 0.08
EPHB3P54753 AC024681.1-201ENST00000521917 487 ntBASIC15.56■□□□□ 0.08
EPHB3P54753 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.56■□□□□ 0.08
EPHB3P54753 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.56■□□□□ 0.08
EPHB3P54753 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
EPHB3P54753 AL161670.2-201ENST00000557650 1227 ntBASIC15.56■□□□□ 0.08
EPHB3P54753 AC079328.1-201ENST00000560358 952 ntBASIC15.56■□□□□ 0.08
EPHB3P54753 AC005962.1-201ENST00000584100 773 ntBASIC15.56■□□□□ 0.08
EPHB3P54753 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.56■□□□□ 0.08
EPHB3P54753 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.56■□□□□ 0.08
EPHB3P54753 AC015967.2-201ENST00000624092 234 ntBASIC15.56■□□□□ 0.08
EPHB3P54753 AC006435.4-201ENST00000625037 234 ntBASIC15.56■□□□□ 0.08
EPHB3P54753 AL356737.1-201ENST00000634391 234 ntBASIC15.56■□□□□ 0.08
EPHB3P54753 NAP1L6-202ENST00000641404 1222 ntBASIC15.56■□□□□ 0.08
EPHB3P54753 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.56■□□□□ 0.08
EPHB3P54753 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.56■□□□□ 0.08
EPHB3P54753 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.56■□□□□ 0.08
EPHB3P54753 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.56■□□□□ 0.08
EPHB3P54753 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
EPHB3P54753 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms