Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.15□□□□□ -0.14
SMSP52788 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.15□□□□□ -0.14
SMSP52788 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.15□□□□□ -0.14
SMSP52788 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.15□□□□□ -0.14
SMSP52788 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SMSP52788 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.15□□□□□ -0.14
SMSP52788 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.15□□□□□ -0.14
SMSP52788 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 AZGP1P1-201ENST00000411909 902 ntBASIC14.15□□□□□ -0.14
SMSP52788 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.15□□□□□ -0.14
SMSP52788 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.15□□□□□ -0.14
SMSP52788 RPL13AP25-201ENST00000484130 612 ntBASIC14.15□□□□□ -0.14
SMSP52788 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SMSP52788 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.15□□□□□ -0.14
SMSP52788 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.15□□□□□ -0.14
SMSP52788 TDH-203ENST00000531764 1110 ntBASIC14.15□□□□□ -0.14
SMSP52788 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.15□□□□□ -0.14
SMSP52788 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SMSP52788 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.15□□□□□ -0.14
SMSP52788 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.15□□□□□ -0.14
SMSP52788 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.15□□□□□ -0.14
SMSP52788 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
SMSP52788 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.15□□□□□ -0.14
SMSP52788 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.15□□□□□ -0.14
SMSP52788 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SMSP52788 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.15□□□□□ -0.14
SMSP52788 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.15□□□□□ -0.14
SMSP52788 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.15□□□□□ -0.14
SMSP52788 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.15□□□□□ -0.14
SMSP52788 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SMSP52788 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 REXO1L2P-201ENST00000425429 2069 ntBASIC14.14□□□□□ -0.15
SMSP52788 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.14□□□□□ -0.15
SMSP52788 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.14□□□□□ -0.15
SMSP52788 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SMSP52788 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.14□□□□□ -0.15
SMSP52788 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SMSP52788 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
SMSP52788 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
SMSP52788 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.14□□□□□ -0.15
SMSP52788 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.14□□□□□ -0.15
SMSP52788 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.14□□□□□ -0.15
SMSP52788 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.14□□□□□ -0.15
SMSP52788 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.14□□□□□ -0.15
SMSP52788 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SMSP52788 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.14□□□□□ -0.15
SMSP52788 FAM21FP-201ENST00000426241 1131 ntBASIC14.14□□□□□ -0.15
SMSP52788 ACTG1P3-201ENST00000431775 1114 ntBASIC14.14□□□□□ -0.15
SMSP52788 USP32P1-208ENST00000506594 1164 ntBASIC14.14□□□□□ -0.15
SMSP52788 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.14□□□□□ -0.15
SMSP52788 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SMSP52788 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.14□□□□□ -0.15
SMSP52788 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.14□□□□□ -0.15
SMSP52788 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.14□□□□□ -0.15
SMSP52788 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SMSP52788 Z97205.2-201ENST00000564697 1639 ntBASIC14.14□□□□□ -0.15
SMSP52788 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SMSP52788 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms