Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC3P51654 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
GPC3P51654 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
GPC3P51654 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.53■□□□□ 0.24
GPC3P51654 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.53■□□□□ 0.24
GPC3P51654 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.53■□□□□ 0.24
GPC3P51654 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC3P51654 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.53■□□□□ 0.24
GPC3P51654 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.53■□□□□ 0.24
GPC3P51654 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GPC3P51654 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.53■□□□□ 0.24
GPC3P51654 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC3P51654 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.53■□□□□ 0.24
GPC3P51654 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC3P51654 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.53■□□□□ 0.24
GPC3P51654 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.53■□□□□ 0.24
GPC3P51654 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
GPC3P51654 AL139099.5-201ENST00000635274 300 ntBASIC16.53■□□□□ 0.24
GPC3P51654 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC3P51654 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
GPC3P51654 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC3P51654 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC3P51654 AC011840.2-201ENST00000563063 1520 ntBASIC16.53■□□□□ 0.24
GPC3P51654 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GPC3P51654 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
GPC3P51654 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC3P51654 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GPC3P51654 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC3P51654 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.53■□□□□ 0.24
GPC3P51654 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC3P51654 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.53■□□□□ 0.24
GPC3P51654 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
GPC3P51654 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.53■□□□□ 0.24
GPC3P51654 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC3P51654 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
GPC3P51654 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPC3P51654 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
GPC3P51654 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPC3P51654 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPC3P51654 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GPC3P51654 AC009093.2-202ENST00000620513 2079 ntBASIC16.52■□□□□ 0.24
GPC3P51654 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.52■□□□□ 0.24
GPC3P51654 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPC3P51654 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.52■□□□□ 0.24
GPC3P51654 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPC3P51654 TSPY26P-202ENST00000565928 3884 ntBASIC16.52■□□□□ 0.24
GPC3P51654 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.52■□□□□ 0.24
GPC3P51654 RN7SKP230-201ENST00000365642 335 ntBASIC16.52■□□□□ 0.24
GPC3P51654 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
GPC3P51654 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.52■□□□□ 0.24
GPC3P51654 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.52■□□□□ 0.24
GPC3P51654 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.52■□□□□ 0.24
GPC3P51654 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.52■□□□□ 0.24
GPC3P51654 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.52■□□□□ 0.24
GPC3P51654 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.52■□□□□ 0.24
GPC3P51654 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.52■□□□□ 0.24
GPC3P51654 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.52■□□□□ 0.24
GPC3P51654 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
GPC3P51654 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.52■□□□□ 0.23
GPC3P51654 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GPC3P51654 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
GPC3P51654 LINC01101-201ENST00000622953 1884 ntBASIC16.52■□□□□ 0.23
GPC3P51654 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GPC3P51654 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.52■□□□□ 0.23
GPC3P51654 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GPC3P51654 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC3P51654 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.51■□□□□ 0.23
GPC3P51654 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.51■□□□□ 0.23
GPC3P51654 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GPC3P51654 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.51■□□□□ 0.23
GPC3P51654 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GPC3P51654 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GPC3P51654 AC013726.1-201ENST00000563747 2285 ntBASIC16.51■□□□□ 0.23
GPC3P51654 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC3P51654 AC020910.5-201ENST00000623668 1865 ntBASIC16.51■□□□□ 0.23
GPC3P51654 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC3P51654 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.51■□□□□ 0.23
GPC3P51654 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC3P51654 BCYRN1-201ENST00000418539 200 ntBASIC16.51■□□□□ 0.23
GPC3P51654 AL354877.1-201ENST00000424412 413 ntBASIC16.51■□□□□ 0.23
GPC3P51654 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.51■□□□□ 0.23
GPC3P51654 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GPC3P51654 AC091804.1-201ENST00000486888 567 ntBASIC16.51■□□□□ 0.23
GPC3P51654 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GPC3P51654 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.51■□□□□ 0.23
GPC3P51654 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC3P51654 AC005730.2-201ENST00000564549 1184 ntBASIC16.51■□□□□ 0.23
GPC3P51654 AL358472.3-201ENST00000608147 415 ntBASIC16.51■□□□□ 0.23
GPC3P51654 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.51■□□□□ 0.23
GPC3P51654 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GPC3P51654 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC3P51654 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC3P51654 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GPC3P51654 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.51■□□□□ 0.23
GPC3P51654 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC3P51654 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC3P51654 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GPC3P51654 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC3P51654 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GPC3P51654 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms