Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC25.88■■□□□ 1.73
SMARCA4P51532 GSN-206ENST00000394353 2311 ntTSL 2 BASIC25.88■■□□□ 1.73
SMARCA4P51532 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC25.88■■□□□ 1.73
SMARCA4P51532 HINT1-205ENST00000508488 703 ntTSL 2 BASIC25.88■■□□□ 1.73
SMARCA4P51532 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC25.88■■□□□ 1.73
SMARCA4P51532 VENTXP3-201ENST00000546480 773 ntBASIC25.88■■□□□ 1.73
SMARCA4P51532 MBP-238ENST00000580402 915 ntTSL 5 BASIC25.88■■□□□ 1.73
SMARCA4P51532 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC25.88■■□□□ 1.73
SMARCA4P51532 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SMARCA4P51532 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC25.88■■□□□ 1.73
SMARCA4P51532 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCA4P51532 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC25.87■■□□□ 1.73
SMARCA4P51532 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
SMARCA4P51532 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCA4P51532 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCA4P51532 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC25.87■■□□□ 1.73
SMARCA4P51532 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCA4P51532 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC25.87■■□□□ 1.73
SMARCA4P51532 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCA4P51532 SAT1-201ENST00000379251 801 ntTSL 2 BASIC25.87■■□□□ 1.73
SMARCA4P51532 SAT1-202ENST00000379253 909 ntTSL 2 BASIC25.87■■□□□ 1.73
SMARCA4P51532 SAT1-203ENST00000379254 868 ntTSL 3 BASIC25.87■■□□□ 1.73
SMARCA4P51532 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCA4P51532 OR52M2P-201ENST00000414298 959 ntBASIC25.87■■□□□ 1.73
SMARCA4P51532 AL161932.2-201ENST00000435436 679 ntBASIC25.87■■□□□ 1.73
SMARCA4P51532 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCA4P51532 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC25.87■■□□□ 1.73
SMARCA4P51532 MIR5001-201ENST00000580185 100 ntBASIC25.87■■□□□ 1.73
SMARCA4P51532 AP005264.5-201ENST00000590066 467 ntBASIC25.87■■□□□ 1.73
SMARCA4P51532 RARS-210ENST00000626454 177 ntTSL 5 BASIC25.87■■□□□ 1.73
SMARCA4P51532 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC25.87■■□□□ 1.73
SMARCA4P51532 AC015688.4-201ENST00000580780 1647 ntBASIC25.87■■□□□ 1.73
SMARCA4P51532 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC25.87■■□□□ 1.73
SMARCA4P51532 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC25.87■■□□□ 1.73
SMARCA4P51532 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC25.87■■□□□ 1.73
SMARCA4P51532 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC25.87■■□□□ 1.73
SMARCA4P51532 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMARCA4P51532 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.86■■□□□ 1.73
SMARCA4P51532 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SMARCA4P51532 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SMARCA4P51532 SF1-209ENST00000433274 2317 ntTSL 2 BASIC25.86■■□□□ 1.73
SMARCA4P51532 AC136621.1-201ENST00000624017 2304 ntBASIC25.86■■□□□ 1.73
SMARCA4P51532 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SMARCA4P51532 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC25.86■■□□□ 1.73
SMARCA4P51532 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
SMARCA4P51532 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
SMARCA4P51532 UROS-201ENST00000368774 744 ntTSL 2 BASIC25.86■■□□□ 1.73
SMARCA4P51532 RPL3P5-201ENST00000441645 1232 ntBASIC25.86■■□□□ 1.73
SMARCA4P51532 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC25.86■■□□□ 1.73
SMARCA4P51532 AC005740.1-201ENST00000515639 522 ntBASIC25.86■■□□□ 1.73
SMARCA4P51532 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SMARCA4P51532 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SMARCA4P51532 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SMARCA4P51532 AC004554.1-201ENST00000422830 1468 ntBASIC25.86■■□□□ 1.73
SMARCA4P51532 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SMARCA4P51532 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC25.86■■□□□ 1.73
SMARCA4P51532 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC25.86■■□□□ 1.73
SMARCA4P51532 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SMARCA4P51532 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SMARCA4P51532 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SMARCA4P51532 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
SMARCA4P51532 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SMARCA4P51532 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC25.86■■□□□ 1.73
SMARCA4P51532 KRT8P18-201ENST00000413425 1445 ntBASIC25.86■■□□□ 1.73
SMARCA4P51532 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SMARCA4P51532 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
SMARCA4P51532 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCA4P51532 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC25.85■■□□□ 1.73
SMARCA4P51532 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
SMARCA4P51532 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCA4P51532 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC25.85■■□□□ 1.73
SMARCA4P51532 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
SMARCA4P51532 HLA-DPA2-205ENST00000433582 733 ntBASIC25.85■■□□□ 1.73
SMARCA4P51532 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC25.85■■□□□ 1.73
SMARCA4P51532 AL451000.1-201ENST00000451300 1186 ntBASIC25.85■■□□□ 1.73
SMARCA4P51532 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC25.85■■□□□ 1.73
SMARCA4P51532 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC25.85■■□□□ 1.73
SMARCA4P51532 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
SMARCA4P51532 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCA4P51532 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC25.85■■□□□ 1.73
SMARCA4P51532 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC25.85■■□□□ 1.73
SMARCA4P51532 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCA4P51532 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC25.85■■□□□ 1.73
SMARCA4P51532 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCA4P51532 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC25.85■■□□□ 1.73
SMARCA4P51532 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC25.85■■□□□ 1.73
SMARCA4P51532 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCA4P51532 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCA4P51532 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC25.85■■□□□ 1.73
SMARCA4P51532 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCA4P51532 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SMARCA4P51532 AL118508.1-201ENST00000613502 2345 ntBASIC25.85■■□□□ 1.73
SMARCA4P51532 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC25.85■■□□□ 1.73
SMARCA4P51532 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC25.85■■□□□ 1.73
SMARCA4P51532 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC25.85■■□□□ 1.73
SMARCA4P51532 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC25.85■■□□□ 1.73
SMARCA4P51532 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC25.85■■□□□ 1.73
SMARCA4P51532 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC25.85■■□□□ 1.73
SMARCA4P51532 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC25.85■■□□□ 1.73
SMARCA4P51532 SKA2-205ENST00000580541 689 ntTSL 3 BASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms