Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.86■□□□□ 0.13
RFC1P35251 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.86■□□□□ 0.13
RFC1P35251 AC126335.2-201ENST00000623362 4637 ntBASIC15.86■□□□□ 0.13
RFC1P35251 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.86■□□□□ 0.13
RFC1P35251 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
RFC1P35251 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RFC1P35251 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.86■□□□□ 0.13
RFC1P35251 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.86■□□□□ 0.13
RFC1P35251 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFC1P35251 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.86■□□□□ 0.13
RFC1P35251 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RFC1P35251 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.85■□□□□ 0.13
RFC1P35251 MYO15B-237ENST00000642007 4893 ntBASIC15.85■□□□□ 0.13
RFC1P35251 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RFC1P35251 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC1P35251 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFC1P35251 AC005912.2-201ENST00000619492 2400 ntBASIC15.85■□□□□ 0.13
RFC1P35251 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.85■□□□□ 0.13
RFC1P35251 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC1P35251 LRRC59-203ENST00000576448 1531 ntBASIC15.85■□□□□ 0.13
RFC1P35251 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC1P35251 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC1P35251 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC1P35251 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.85■□□□□ 0.13
RFC1P35251 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
RFC1P35251 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC1P35251 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.85■□□□□ 0.13
RFC1P35251 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.85■□□□□ 0.13
RFC1P35251 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.85■□□□□ 0.13
RFC1P35251 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
RFC1P35251 AC025048.6-201ENST00000634326 1161 ntBASIC15.85■□□□□ 0.13
RFC1P35251 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
RFC1P35251 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC1P35251 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC1P35251 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.85■□□□□ 0.13
RFC1P35251 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC1P35251 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RFC1P35251 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
RFC1P35251 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
RFC1P35251 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC1P35251 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RFC1P35251 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC1P35251 AC018665.1-201ENST00000622927 1362 ntBASIC15.85■□□□□ 0.13
RFC1P35251 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC1P35251 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.85■□□□□ 0.13
RFC1P35251 AC139749.1-202ENST00000617529 3139 ntBASIC15.85■□□□□ 0.13
RFC1P35251 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFC1P35251 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RFC1P35251 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RFC1P35251 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.85■□□□□ 0.13
RFC1P35251 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RFC1P35251 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.84■□□□□ 0.13
RFC1P35251 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.84■□□□□ 0.13
RFC1P35251 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
RFC1P35251 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.84■□□□□ 0.13
RFC1P35251 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
RFC1P35251 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RFC1P35251 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RFC1P35251 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RFC1P35251 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.84■□□□□ 0.13
RFC1P35251 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.84■□□□□ 0.13
RFC1P35251 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.84■□□□□ 0.13
RFC1P35251 AP006294.1-201ENST00000415407 339 ntBASIC15.84■□□□□ 0.13
RFC1P35251 ACTG1P3-201ENST00000431775 1114 ntBASIC15.84■□□□□ 0.13
RFC1P35251 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RFC1P35251 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.84■□□□□ 0.13
RFC1P35251 AC009486.1-201ENST00000569860 813 ntBASIC15.84■□□□□ 0.13
RFC1P35251 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.84■□□□□ 0.13
RFC1P35251 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.84■□□□□ 0.13
RFC1P35251 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.84■□□□□ 0.13
RFC1P35251 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RFC1P35251 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RFC1P35251 PCDHA3-202ENST00000532566 4594 ntBASIC15.84■□□□□ 0.13
RFC1P35251 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.84■□□□□ 0.13
RFC1P35251 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms