Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.04□□□□□ -0.16
CCL4P13236 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.04□□□□□ -0.16
CCL4P13236 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 AL645933.1-201ENST00000440087 609 ntBASIC14.04□□□□□ -0.16
CCL4P13236 AC008267.1-201ENST00000474858 1069 ntBASIC14.04□□□□□ -0.16
CCL4P13236 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL4P13236 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CCL4P13236 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL4P13236 AC131206.1-201ENST00000538078 1211 ntBASIC14.04□□□□□ -0.16
CCL4P13236 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.04□□□□□ -0.16
CCL4P13236 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL4P13236 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
CCL4P13236 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL4P13236 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL4P13236 AL157813.1-201ENST00000612996 587 ntBASIC14.04□□□□□ -0.16
CCL4P13236 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL4P13236 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL4P13236 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CCL4P13236 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL4P13236 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CCL4P13236 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CCL4P13236 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CCL4P13236 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL4P13236 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL4P13236 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CCL4P13236 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL4P13236 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.03□□□□□ -0.16
CCL4P13236 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CCL4P13236 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CCL4P13236 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CCL4P13236 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 OR2K2-202ENST00000374428 1038 ntBASIC14.03□□□□□ -0.16
CCL4P13236 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL4P13236 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.03□□□□□ -0.16
CCL4P13236 AL035414.1-201ENST00000451327 857 ntBASIC14.03□□□□□ -0.16
CCL4P13236 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.03□□□□□ -0.16
CCL4P13236 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL4P13236 AC006122.1-201ENST00000493323 440 ntBASIC14.03□□□□□ -0.16
CCL4P13236 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.03□□□□□ -0.16
CCL4P13236 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 IQSEC3P1-201ENST00000538799 536 ntBASIC14.03□□□□□ -0.16
CCL4P13236 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.03□□□□□ -0.16
CCL4P13236 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.03□□□□□ -0.16
CCL4P13236 RN7SL555P-201ENST00000584742 339 ntBASIC14.03□□□□□ -0.16
CCL4P13236 AC073352.2-201ENST00000609385 439 ntBASIC14.03□□□□□ -0.16
CCL4P13236 AC103691.2-201ENST00000618824 433 ntBASIC14.03□□□□□ -0.16
CCL4P13236 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 CYP4F23P-201ENST00000593402 1579 ntBASIC14.03□□□□□ -0.16
CCL4P13236 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.03□□□□□ -0.16
CCL4P13236 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CCL4P13236 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL4P13236 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL4P13236 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL4P13236 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.03□□□□□ -0.16
CCL4P13236 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL4P13236 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL4P13236 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCL4P13236 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CCL4P13236 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL4P13236 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL4P13236 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL4P13236 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCL4P13236 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL4P13236 AC011270.2-201ENST00000624293 2550 ntBASIC14.02□□□□□ -0.16
CCL4P13236 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL4P13236 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL4P13236 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCL4P13236 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL4P13236 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms