Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
TOP2AP11388 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
TOP2AP11388 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TOP2AP11388 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TOP2AP11388 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
TOP2AP11388 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC25.4■■□□□ 1.66
TOP2AP11388 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
TOP2AP11388 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TOP2AP11388 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TOP2AP11388 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TOP2AP11388 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TOP2AP11388 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC25.39■■□□□ 1.66
TOP2AP11388 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
TOP2AP11388 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC25.39■■□□□ 1.66
TOP2AP11388 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
TOP2AP11388 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC25.39■■□□□ 1.66
TOP2AP11388 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
TOP2AP11388 HCG27-204ENST00000424675 895 ntTSL 3 BASIC25.39■■□□□ 1.66
TOP2AP11388 DNM1P51-201ENST00000558149 522 ntBASIC25.39■■□□□ 1.66
TOP2AP11388 SORD2P-201ENST00000558556 1069 ntBASIC25.39■■□□□ 1.66
TOP2AP11388 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
TOP2AP11388 AC104506.1-201ENST00000609247 429 ntBASIC25.39■■□□□ 1.66
TOP2AP11388 HELLS-212ENST00000630929 400 ntTSL 5 BASIC25.39■■□□□ 1.66
TOP2AP11388 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TOP2AP11388 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TOP2AP11388 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TOP2AP11388 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC25.39■■□□□ 1.66
TOP2AP11388 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC25.39■■□□□ 1.66
TOP2AP11388 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
TOP2AP11388 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC25.39■■□□□ 1.65
TOP2AP11388 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TOP2AP11388 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
TOP2AP11388 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC25.39■■□□□ 1.65
TOP2AP11388 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC25.39■■□□□ 1.65
TOP2AP11388 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TOP2AP11388 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TOP2AP11388 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TOP2AP11388 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC25.38■■□□□ 1.65
TOP2AP11388 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC25.38■■□□□ 1.65
TOP2AP11388 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC25.38■■□□□ 1.65
TOP2AP11388 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
TOP2AP11388 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TOP2AP11388 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TOP2AP11388 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TOP2AP11388 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TOP2AP11388 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TOP2AP11388 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TOP2AP11388 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TOP2AP11388 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TOP2AP11388 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
TOP2AP11388 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TOP2AP11388 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC25.38■■□□□ 1.65
TOP2AP11388 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TOP2AP11388 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TOP2AP11388 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC25.38■■□□□ 1.65
TOP2AP11388 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
TOP2AP11388 LINC00265-2P-201ENST00000413372 782 ntBASIC25.37■■□□□ 1.65
TOP2AP11388 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC25.37■■□□□ 1.65
TOP2AP11388 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC25.37■■□□□ 1.65
TOP2AP11388 AC002472.4-201ENST00000641915 272 ntBASIC25.37■■□□□ 1.65
TOP2AP11388 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC25.37■■□□□ 1.65
TOP2AP11388 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TOP2AP11388 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC25.37■■□□□ 1.65
TOP2AP11388 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
TOP2AP11388 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
TOP2AP11388 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TOP2AP11388 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC25.37■■□□□ 1.65
TOP2AP11388 AC011270.2-201ENST00000624293 2550 ntBASIC25.37■■□□□ 1.65
TOP2AP11388 AC007950.2-201ENST00000615045 2347 ntBASIC25.37■■□□□ 1.65
TOP2AP11388 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TOP2AP11388 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TOP2AP11388 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
TOP2AP11388 AC019109.1-201ENST00000401725 1874 ntBASIC25.37■■□□□ 1.65
TOP2AP11388 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC25.37■■□□□ 1.65
TOP2AP11388 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TOP2AP11388 AC064801.2-201ENST00000625052 1303 ntBASIC25.37■■□□□ 1.65
TOP2AP11388 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC25.37■■□□□ 1.65
TOP2AP11388 AL135901.1-201ENST00000451812 333 ntBASIC25.37■■□□□ 1.65
TOP2AP11388 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TOP2AP11388 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TOP2AP11388 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC25.37■■□□□ 1.65
TOP2AP11388 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
TOP2AP11388 AC010976.2-201ENST00000609697 852 ntBASIC25.37■■□□□ 1.65
TOP2AP11388 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC25.36■■□□□ 1.65
TOP2AP11388 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC25.36■■□□□ 1.65
TOP2AP11388 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TOP2AP11388 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TOP2AP11388 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC25.36■■□□□ 1.65
TOP2AP11388 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC25.36■■□□□ 1.65
TOP2AP11388 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TOP2AP11388 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC25.36■■□□□ 1.65
TOP2AP11388 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
TOP2AP11388 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC25.36■■□□□ 1.65
TOP2AP11388 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC25.36■■□□□ 1.65
TOP2AP11388 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TOP2AP11388 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC25.36■■□□□ 1.65
TOP2AP11388 AQP7P5-201ENST00000428759 1049 ntBASIC25.36■■□□□ 1.65
TOP2AP11388 AQP7P4-201ENST00000447083 1042 ntBASIC25.36■■□□□ 1.65
TOP2AP11388 AQP7P2-201ENST00000453967 1041 ntBASIC25.36■■□□□ 1.65
TOP2AP11388 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms