Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ALDH1A1P00352 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ALDH1A1P00352 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 ACTG1P19-201ENST00000418987 1116 ntBASIC16.8■□□□□ 0.28
ALDH1A1P00352 SERBP1P2-201ENST00000436888 1164 ntBASIC16.8■□□□□ 0.28
ALDH1A1P00352 AC098934.1-203ENST00000442868 1262 ntBASIC16.8■□□□□ 0.28
ALDH1A1P00352 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ALDH1A1P00352 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
ALDH1A1P00352 RN7SL665P-201ENST00000578793 300 ntBASIC16.8■□□□□ 0.28
ALDH1A1P00352 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ALDH1A1P00352 RPS5-204ENST00000598098 536 ntTSL 2 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 AL139339.2-201ENST00000608063 657 ntBASIC16.8■□□□□ 0.28
ALDH1A1P00352 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ALDH1A1P00352 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ALDH1A1P00352 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ALDH1A1P00352 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ALDH1A1P00352 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ALDH1A1P00352 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ALDH1A1P00352 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ALDH1A1P00352 AC007292.2-201ENST00000593524 1812 ntBASIC16.8■□□□□ 0.28
ALDH1A1P00352 AC009093.10-201ENST00000641956 1442 ntBASIC16.79■□□□□ 0.28
ALDH1A1P00352 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ALDH1A1P00352 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ALDH1A1P00352 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ALDH1A1P00352 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ALDH1A1P00352 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ALDH1A1P00352 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 AC083801.1-201ENST00000491689 358 ntBASIC16.79■□□□□ 0.28
ALDH1A1P00352 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 AC012073.1-201ENST00000606114 1108 ntBASIC16.79■□□□□ 0.28
ALDH1A1P00352 AC006483.2-201ENST00000609813 515 ntBASIC16.79■□□□□ 0.28
ALDH1A1P00352 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ALDH1A1P00352 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ALDH1A1P00352 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ALDH1A1P00352 FER1L4-210ENST00000615531 5998 ntBASIC16.79■□□□□ 0.28
ALDH1A1P00352 AC092364.2-201ENST00000596710 2692 ntBASIC16.79■□□□□ 0.28
ALDH1A1P00352 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ALDH1A1P00352 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.78■□□□□ 0.28
ALDH1A1P00352 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ALDH1A1P00352 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.78■□□□□ 0.28
ALDH1A1P00352 AC010632.2-201ENST00000588369 1224 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms