Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLIC3O95833 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.93□□□□□ -0.18
CLIC3O95833 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.92□□□□□ -0.18
CLIC3O95833 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.92□□□□□ -0.18
CLIC3O95833 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.92□□□□□ -0.18
CLIC3O95833 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CLIC3O95833 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.92□□□□□ -0.18
CLIC3O95833 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.92□□□□□ -0.18
CLIC3O95833 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.92□□□□□ -0.18
CLIC3O95833 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.92□□□□□ -0.18
CLIC3O95833 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLIC3O95833 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.92□□□□□ -0.18
CLIC3O95833 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLIC3O95833 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.92□□□□□ -0.18
CLIC3O95833 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.92□□□□□ -0.18
CLIC3O95833 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLIC3O95833 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
CLIC3O95833 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLIC3O95833 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CLIC3O95833 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLIC3O95833 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.92□□□□□ -0.18
CLIC3O95833 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
CLIC3O95833 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.92□□□□□ -0.18
CLIC3O95833 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CLIC3O95833 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLIC3O95833 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLIC3O95833 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CLIC3O95833 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLIC3O95833 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.91□□□□□ -0.18
CLIC3O95833 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLIC3O95833 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLIC3O95833 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLIC3O95833 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLIC3O95833 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLIC3O95833 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLIC3O95833 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
CLIC3O95833 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CLIC3O95833 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLIC3O95833 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.91□□□□□ -0.18
CLIC3O95833 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLIC3O95833 AL022342.1-201ENST00000400363 863 ntBASIC13.91□□□□□ -0.18
CLIC3O95833 AC074338.1-201ENST00000416825 156 ntBASIC13.91□□□□□ -0.18
CLIC3O95833 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.91□□□□□ -0.18
CLIC3O95833 AC079781.3-201ENST00000449110 356 ntBASIC13.91□□□□□ -0.18
CLIC3O95833 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.91□□□□□ -0.18
CLIC3O95833 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLIC3O95833 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.91□□□□□ -0.18
CLIC3O95833 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.91□□□□□ -0.18
CLIC3O95833 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.91□□□□□ -0.18
CLIC3O95833 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CLIC3O95833 AC116407.3-201ENST00000623905 1129 ntBASIC13.91□□□□□ -0.18
CLIC3O95833 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLIC3O95833 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLIC3O95833 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CLIC3O95833 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLIC3O95833 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLIC3O95833 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLIC3O95833 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.91□□□□□ -0.18
CLIC3O95833 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLIC3O95833 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLIC3O95833 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.91□□□□□ -0.18
CLIC3O95833 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLIC3O95833 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLIC3O95833 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CLIC3O95833 AL445209.1-201ENST00000607269 3491 ntBASIC13.91□□□□□ -0.18
CLIC3O95833 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLIC3O95833 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.91□□□□□ -0.18
CLIC3O95833 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLIC3O95833 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLIC3O95833 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.9□□□□□ -0.18
CLIC3O95833 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CLIC3O95833 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLIC3O95833 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CLIC3O95833 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms