Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GPC4O75487 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC4O75487 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC4O75487 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC4O75487 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC4O75487 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
GPC4O75487 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
GPC4O75487 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC4O75487 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
GPC4O75487 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
GPC4O75487 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC4O75487 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC4O75487 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC4O75487 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC4O75487 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC4O75487 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.13■□□□□ 0.01
GPC4O75487 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC4O75487 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC4O75487 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.13■□□□□ 0.01
GPC4O75487 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.13■□□□□ 0.01
GPC4O75487 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.13■□□□□ 0.01
GPC4O75487 CRB3P1-201ENST00000449338 276 ntBASIC15.13■□□□□ 0.01
GPC4O75487 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.13■□□□□ 0.01
GPC4O75487 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.13■□□□□ 0.01
GPC4O75487 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.13■□□□□ 0.01
GPC4O75487 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.13■□□□□ 0.01
GPC4O75487 PTENP1-202ENST00000532280 3996 ntBASIC15.13■□□□□ 0.01
GPC4O75487 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.13■□□□□ 0.01
GPC4O75487 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.13■□□□□ 0.01
GPC4O75487 AC140912.1-201ENST00000577171 1054 ntBASIC15.13■□□□□ 0.01
GPC4O75487 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.13■□□□□ 0.01
GPC4O75487 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.13■□□□□ 0.01
GPC4O75487 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.13■□□□□ 0.01
GPC4O75487 AC138761.1-201ENST00000584393 385 ntBASIC15.13■□□□□ 0.01
GPC4O75487 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
GPC4O75487 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.13■□□□□ 0.01
GPC4O75487 AC107373.2-201ENST00000607735 490 ntBASIC15.13■□□□□ 0.01
GPC4O75487 AC007431.3-201ENST00000623221 587 ntBASIC15.13■□□□□ 0.01
GPC4O75487 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC4O75487 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
GPC4O75487 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.13■□□□□ 0.01
GPC4O75487 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC4O75487 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.13■□□□□ 0.01
GPC4O75487 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
GPC4O75487 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.13■□□□□ 0.01
GPC4O75487 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC4O75487 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC4O75487 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.13■□□□□ 0.01
GPC4O75487 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GPC4O75487 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.13■□□□□ 0.01
GPC4O75487 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GPC4O75487 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.13■□□□□ 0.01
GPC4O75487 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
GPC4O75487 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.12■□□□□ 0.01
GPC4O75487 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.12■□□□□ 0.01
GPC4O75487 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC4O75487 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.12■□□□□ 0.01
GPC4O75487 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.12■□□□□ 0.01
GPC4O75487 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC4O75487 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.12■□□□□ 0.01
GPC4O75487 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.12■□□□□ 0.01
GPC4O75487 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.12■□□□□ 0.01
GPC4O75487 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC4O75487 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC4O75487 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.12■□□□□ 0.01
GPC4O75487 ELK1P1-201ENST00000485699 580 ntBASIC15.12■□□□□ 0.01
GPC4O75487 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.12■□□□□ 0.01
GPC4O75487 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.12■□□□□ 0.01
GPC4O75487 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.12■□□□□ 0.01
GPC4O75487 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.12■□□□□ 0.01
GPC4O75487 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.12■□□□□ 0.01
GPC4O75487 AC093813.1-201ENST00000605066 256 ntBASIC15.12■□□□□ 0.01
GPC4O75487 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.12■□□□□ 0.01
GPC4O75487 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
GPC4O75487 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC4O75487 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC4O75487 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.12■□□□□ 0.01
GPC4O75487 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.12■□□□□ 0.01
GPC4O75487 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC4O75487 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC4O75487 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
GPC4O75487 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
GPC4O75487 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.12■□□□□ 0.01
GPC4O75487 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC4O75487 AC104581.4-201ENST00000623126 3052 ntBASIC15.12■□□□□ 0.01
GPC4O75487 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.12■□□□□ 0.01
GPC4O75487 INTS4P2-202ENST00000614726 2019 ntBASIC15.12■□□□□ 0.01
GPC4O75487 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC4O75487 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GPC4O75487 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GPC4O75487 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
GPC4O75487 CICP4-201ENST00000447359 2812 ntBASIC15.12■□□□□ 0.01
GPC4O75487 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 AC117489.1-201ENST00000625169 3217 ntBASIC15.11■□□□□ 0.01
GPC4O75487 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.11■□□□□ 0.01
GPC4O75487 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GPC4O75487 AC140479.7-201ENST00000636301 2332 ntBASIC15.11■□□□□ 0.01
GPC4O75487 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms