Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNSO60931 MIR1202-201ENST00000408529 83 ntBASIC14.07□□□□□ -0.16
CTNSO60931 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.07□□□□□ -0.16
CTNSO60931 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNSO60931 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.07□□□□□ -0.16
CTNSO60931 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.07□□□□□ -0.16
CTNSO60931 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.07□□□□□ -0.16
CTNSO60931 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CTNSO60931 AC106820.3-201ENST00000561653 397 ntBASIC14.07□□□□□ -0.16
CTNSO60931 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CTNSO60931 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.07□□□□□ -0.16
CTNSO60931 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.07□□□□□ -0.16
CTNSO60931 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.07□□□□□ -0.16
CTNSO60931 AC138696.2-201ENST00000607376 223 ntBASIC14.07□□□□□ -0.16
CTNSO60931 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.07□□□□□ -0.16
CTNSO60931 AC008687.7-202ENST00000637404 953 ntBASIC14.07□□□□□ -0.16
CTNSO60931 COX11-210ENST00000639671 696 ntBASIC14.07□□□□□ -0.16
CTNSO60931 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
CTNSO60931 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNSO60931 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.07□□□□□ -0.16
CTNSO60931 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.07□□□□□ -0.16
CTNSO60931 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.07□□□□□ -0.16
CTNSO60931 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNSO60931 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CTNSO60931 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTNSO60931 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTNSO60931 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNSO60931 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNSO60931 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.07□□□□□ -0.16
CTNSO60931 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNSO60931 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNSO60931 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTNSO60931 AP000593.2-201ENST00000542775 1433 ntBASIC14.07□□□□□ -0.16
CTNSO60931 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.06□□□□□ -0.16
CTNSO60931 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.06□□□□□ -0.16
CTNSO60931 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.06□□□□□ -0.16
CTNSO60931 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CTNSO60931 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.06□□□□□ -0.16
CTNSO60931 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.06□□□□□ -0.16
CTNSO60931 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 RN7SKP230-201ENST00000365642 335 ntBASIC14.06□□□□□ -0.16
CTNSO60931 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.06□□□□□ -0.16
CTNSO60931 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 MIR658-201ENST00000385210 100 ntBASIC14.06□□□□□ -0.16
CTNSO60931 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CTNSO60931 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CTNSO60931 AC026954.1-201ENST00000429771 1293 ntBASIC14.06□□□□□ -0.16
CTNSO60931 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CTNSO60931 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CTNSO60931 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.06□□□□□ -0.16
CTNSO60931 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.06□□□□□ -0.16
CTNSO60931 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.06□□□□□ -0.16
CTNSO60931 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.06□□□□□ -0.16
CTNSO60931 OR10B1P-201ENST00000601666 907 ntBASIC14.06□□□□□ -0.16
CTNSO60931 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CTNSO60931 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.06□□□□□ -0.16
CTNSO60931 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.06□□□□□ -0.16
CTNSO60931 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CTNSO60931 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.06□□□□□ -0.16
CTNSO60931 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTNSO60931 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTNSO60931 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CTNSO60931 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
CTNSO60931 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CTNSO60931 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CTNSO60931 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
CTNSO60931 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CTNSO60931 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.05□□□□□ -0.16
CTNSO60931 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms