Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.36□□□□□ -0.11
LCMT2O60294 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.36□□□□□ -0.11
LCMT2O60294 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.36□□□□□ -0.11
LCMT2O60294 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LCMT2O60294 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.36□□□□□ -0.11
LCMT2O60294 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
LCMT2O60294 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LCMT2O60294 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 AL138725.1-201ENST00000407347 1314 ntBASIC14.36□□□□□ -0.11
LCMT2O60294 FKBP4P6-201ENST00000457486 1332 ntBASIC14.36□□□□□ -0.11
LCMT2O60294 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.36□□□□□ -0.11
LCMT2O60294 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LCMT2O60294 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.36□□□□□ -0.11
LCMT2O60294 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LCMT2O60294 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LCMT2O60294 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCMT2O60294 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCMT2O60294 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LCMT2O60294 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.35□□□□□ -0.11
LCMT2O60294 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.35□□□□□ -0.11
LCMT2O60294 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCMT2O60294 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCMT2O60294 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
LCMT2O60294 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LCMT2O60294 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
LCMT2O60294 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.35□□□□□ -0.11
LCMT2O60294 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCMT2O60294 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LCMT2O60294 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.35□□□□□ -0.11
LCMT2O60294 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCMT2O60294 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LCMT2O60294 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCMT2O60294 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LCMT2O60294 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LCMT2O60294 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCMT2O60294 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.35□□□□□ -0.11
LCMT2O60294 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.35□□□□□ -0.11
LCMT2O60294 AC007969.1-201ENST00000433675 447 ntBASIC14.35□□□□□ -0.11
LCMT2O60294 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
LCMT2O60294 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.35□□□□□ -0.11
LCMT2O60294 KLF2P4-201ENST00000451959 1225 ntBASIC14.35□□□□□ -0.11
LCMT2O60294 FTLP10-202ENST00000505798 471 ntBASIC14.35□□□□□ -0.11
LCMT2O60294 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.35□□□□□ -0.11
LCMT2O60294 AP003171.2-201ENST00000528208 925 ntBASIC14.35□□□□□ -0.11
LCMT2O60294 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.35□□□□□ -0.11
LCMT2O60294 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LCMT2O60294 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.35□□□□□ -0.11
LCMT2O60294 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.35□□□□□ -0.11
LCMT2O60294 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.35□□□□□ -0.11
LCMT2O60294 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.35□□□□□ -0.11
LCMT2O60294 AC006453.4-201ENST00000636949 1252 ntBASIC14.35□□□□□ -0.11
LCMT2O60294 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCMT2O60294 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCMT2O60294 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCMT2O60294 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.35□□□□□ -0.11
LCMT2O60294 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCMT2O60294 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LCMT2O60294 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.35□□□□□ -0.11
LCMT2O60294 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.35□□□□□ -0.11
LCMT2O60294 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LCMT2O60294 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LCMT2O60294 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.35□□□□□ -0.11
LCMT2O60294 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LCMT2O60294 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.35□□□□□ -0.11
LCMT2O60294 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.35□□□□□ -0.11
LCMT2O60294 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.34□□□□□ -0.11
LCMT2O60294 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LCMT2O60294 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.34□□□□□ -0.11
LCMT2O60294 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.34□□□□□ -0.11
LCMT2O60294 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LCMT2O60294 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LCMT2O60294 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.34□□□□□ -0.11
LCMT2O60294 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LCMT2O60294 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 BOLA2P3-201ENST00000404566 256 ntBASIC14.34□□□□□ -0.11
LCMT2O60294 CD8B2-202ENST00000417670 633 ntBASIC14.34□□□□□ -0.11
LCMT2O60294 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LCMT2O60294 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.34□□□□□ -0.11
LCMT2O60294 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LCMT2O60294 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms