Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.31□□□□□ -0.44
SSSCA1O60232 SLC25A39P2-201ENST00000537614 270 ntBASIC12.31□□□□□ -0.44
SSSCA1O60232 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.31□□□□□ -0.44
SSSCA1O60232 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.31□□□□□ -0.44
SSSCA1O60232 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.31□□□□□ -0.44
SSSCA1O60232 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.31□□□□□ -0.44
SSSCA1O60232 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.31□□□□□ -0.44
SSSCA1O60232 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SSSCA1O60232 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
SSSCA1O60232 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.31□□□□□ -0.44
SSSCA1O60232 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.31□□□□□ -0.44
SSSCA1O60232 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.31□□□□□ -0.44
SSSCA1O60232 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.31□□□□□ -0.44
SSSCA1O60232 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SSSCA1O60232 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SSSCA1O60232 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSSCA1O60232 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SSSCA1O60232 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.3□□□□□ -0.44
SSSCA1O60232 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.3□□□□□ -0.44
SSSCA1O60232 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SSSCA1O60232 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.3□□□□□ -0.44
SSSCA1O60232 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 MEX3B-202ENST00000558133 4333 ntBASIC12.3□□□□□ -0.44
SSSCA1O60232 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.3□□□□□ -0.44
SSSCA1O60232 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.3□□□□□ -0.44
SSSCA1O60232 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SSSCA1O60232 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SSSCA1O60232 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SSSCA1O60232 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.3□□□□□ -0.44
SSSCA1O60232 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.3□□□□□ -0.44
SSSCA1O60232 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.3□□□□□ -0.44
SSSCA1O60232 AC079140.1-201ENST00000508039 487 ntBASIC12.3□□□□□ -0.44
SSSCA1O60232 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.3□□□□□ -0.44
SSSCA1O60232 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.3□□□□□ -0.44
SSSCA1O60232 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.3□□□□□ -0.44
SSSCA1O60232 KRT8P23-201ENST00000560090 1207 ntBASIC12.3□□□□□ -0.44
SSSCA1O60232 AC105021.1-202ENST00000570572 669 ntBASIC12.3□□□□□ -0.44
SSSCA1O60232 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.3□□□□□ -0.44
SSSCA1O60232 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.3□□□□□ -0.44
SSSCA1O60232 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.3□□□□□ -0.44
SSSCA1O60232 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.3□□□□□ -0.44
SSSCA1O60232 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.3□□□□□ -0.44
SSSCA1O60232 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.3□□□□□ -0.44
SSSCA1O60232 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.3□□□□□ -0.44
SSSCA1O60232 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.3□□□□□ -0.44
SSSCA1O60232 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.3□□□□□ -0.44
SSSCA1O60232 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.3□□□□□ -0.44
SSSCA1O60232 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.3□□□□□ -0.44
SSSCA1O60232 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.3□□□□□ -0.44
SSSCA1O60232 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SSSCA1O60232 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SSSCA1O60232 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms