Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL21O00585 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CCL21O00585 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.12□□□□□ -0.31
CCL21O00585 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL21O00585 AC144522.1-201ENST00000625111 1658 ntBASIC13.12□□□□□ -0.31
CCL21O00585 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL21O00585 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CCL21O00585 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL21O00585 HYMAI-201ENST00000635591 3347 ntBASIC13.11□□□□□ -0.31
CCL21O00585 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL21O00585 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL21O00585 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL21O00585 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCL21O00585 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL21O00585 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCL21O00585 AC003102.2-201ENST00000589195 1469 ntBASIC13.11□□□□□ -0.31
CCL21O00585 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL21O00585 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCL21O00585 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL21O00585 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL21O00585 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 AL583805.1-201ENST00000391389 531 ntBASIC13.11□□□□□ -0.31
CCL21O00585 AL512430.1-201ENST00000392575 860 ntBASIC13.11□□□□□ -0.31
CCL21O00585 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL21O00585 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL21O00585 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL21O00585 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL21O00585 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL21O00585 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL21O00585 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL21O00585 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.11□□□□□ -0.31
CCL21O00585 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CCL21O00585 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL21O00585 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CCL21O00585 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL21O00585 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL21O00585 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL21O00585 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL21O00585 CYP51A1P3-201ENST00000400072 1428 ntBASIC13.11□□□□□ -0.31
CCL21O00585 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CCL21O00585 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL21O00585 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCL21O00585 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL21O00585 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL21O00585 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
CCL21O00585 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL21O00585 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCL21O00585 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL21O00585 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CCL21O00585 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 LILRP1-201ENST00000444199 1370 ntBASIC13.1□□□□□ -0.31
CCL21O00585 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
CCL21O00585 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL21O00585 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
CCL21O00585 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CCL21O00585 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL21O00585 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CCL21O00585 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL21O00585 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.1□□□□□ -0.31
CCL21O00585 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL21O00585 PFN2-202ENST00000423691 911 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL21O00585 AL157407.1-201ENST00000435784 904 ntBASIC13.1□□□□□ -0.31
CCL21O00585 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC13.1□□□□□ -0.31
CCL21O00585 AP000358.1-201ENST00000456260 156 ntBASIC13.1□□□□□ -0.31
CCL21O00585 AC006122.1-201ENST00000493323 440 ntBASIC13.1□□□□□ -0.31
CCL21O00585 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL21O00585 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL21O00585 RBM8B-201ENST00000555532 525 ntBASIC13.1□□□□□ -0.31
CCL21O00585 MIR3677-201ENST00000578964 60 ntBASIC13.1□□□□□ -0.31
CCL21O00585 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
CCL21O00585 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms