Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.21■□□□□ 0.03
AP3B1O00203 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.21■□□□□ 0.03
AP3B1O00203 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.21■□□□□ 0.03
AP3B1O00203 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.21■□□□□ 0.03
AP3B1O00203 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.21■□□□□ 0.03
AP3B1O00203 AL132655.2-201ENST00000596276 594 ntBASIC15.21■□□□□ 0.03
AP3B1O00203 AC092364.2-202ENST00000597012 1073 ntBASIC15.21■□□□□ 0.03
AP3B1O00203 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.21■□□□□ 0.03
AP3B1O00203 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3B1O00203 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP3B1O00203 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.21■□□□□ 0.03
AP3B1O00203 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
AP3B1O00203 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP3B1O00203 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
AP3B1O00203 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3B1O00203 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3B1O00203 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP3B1O00203 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3B1O00203 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
AP3B1O00203 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3B1O00203 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP3B1O00203 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.21■□□□□ 0.03
AP3B1O00203 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
AP3B1O00203 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.21■□□□□ 0.02
AP3B1O00203 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
AP3B1O00203 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
AP3B1O00203 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
AP3B1O00203 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
AP3B1O00203 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.21■□□□□ 0.02
AP3B1O00203 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.21■□□□□ 0.02
AP3B1O00203 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
AP3B1O00203 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3B1O00203 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3B1O00203 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.2■□□□□ 0.02
AP3B1O00203 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP3B1O00203 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3B1O00203 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.2■□□□□ 0.02
AP3B1O00203 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
AP3B1O00203 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
AP3B1O00203 AL354702.1-201ENST00000442006 1960 ntBASIC15.2■□□□□ 0.02
AP3B1O00203 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3B1O00203 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3B1O00203 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3B1O00203 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP3B1O00203 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3B1O00203 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP3B1O00203 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3B1O00203 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP3B1O00203 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
AP3B1O00203 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3B1O00203 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3B1O00203 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3B1O00203 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.2■□□□□ 0.02
AP3B1O00203 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
AP3B1O00203 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.2■□□□□ 0.02
AP3B1O00203 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3B1O00203 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
AP3B1O00203 AC022447.6-201ENST00000515522 438 ntBASIC15.2■□□□□ 0.02
AP3B1O00203 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
AP3B1O00203 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP3B1O00203 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3B1O00203 AC009486.1-201ENST00000569860 813 ntBASIC15.2■□□□□ 0.02
AP3B1O00203 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3B1O00203 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.2■□□□□ 0.02
AP3B1O00203 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.2■□□□□ 0.02
AP3B1O00203 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
AP3B1O00203 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3B1O00203 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3B1O00203 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.2■□□□□ 0.02
AP3B1O00203 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
AP3B1O00203 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP3B1O00203 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP3B1O00203 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP3B1O00203 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3B1O00203 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.2■□□□□ 0.02
AP3B1O00203 AGGF1P1-201ENST00000509500 2073 ntBASIC15.2■□□□□ 0.02
AP3B1O00203 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.2■□□□□ 0.02
AP3B1O00203 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3B1O00203 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3B1O00203 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP3B1O00203 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
AP3B1O00203 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
AP3B1O00203 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3B1O00203 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
AP3B1O00203 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3B1O00203 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.19■□□□□ 0.02
AP3B1O00203 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.19■□□□□ 0.02
AP3B1O00203 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.19■□□□□ 0.02
AP3B1O00203 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
AP3B1O00203 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
AP3B1O00203 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
AP3B1O00203 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
AP3B1O00203 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP3B1O00203 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP3B1O00203 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP3B1O00203 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
AP3B1O00203 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.19■□□□□ 0.02
AP3B1O00203 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
AP3B1O00203 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
AP3B1O00203 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms